RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 TAF1BQ53T94 588 aaPredicted RBP16.09■□□□□ 0.17
SND1-203ENST00000463020 ISM2Q6H9L7 571 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 FMR1NBQ8N0W7 255 aaPredicted RBP16.09■□□□□ 0.17
SND1-203ENST00000463020 WDTC1Q8N5D0 677 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 SH2D3CQ8N5H7 860 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 ZNF578Q96N58 590 aaPredicted RBP16.09■□□□□ 0.17
SND1-203ENST00000463020 TSG101Q99816 390 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 TSPY26PQ9H489 355 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 FAM204AQ9H8W3 233 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 POPDC2Q9HBU9 364 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
SND1-203ENST00000463020 PREBQ9HCU5 417 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 KLF15Q9UIH9 416 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 VANGL2Q9ULK5 521 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 TPX2Q9ULW0 747 aaKnown RBP16.09■□□□□ 0.17
SND1-203ENST00000463020 CNTN6Q9UQ52 1028 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 HS3ST4Q9Y661 456 aa16.09■□□□□ 0.17
SND1-203ENST00000463020 TDRD6O60522 2096 aaKnown RBP16.09■□□□□ 0.17
SND1-203ENST00000463020 COL6A6A6NMZ7 2263 aa16.08■□□□□ 0.17
SND1-203ENST00000463020 SYCE3A1L190 88 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 PMM2O15305 246 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 RAD51BO15315 384 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.16
SND1-203ENST00000463020 DXOO77932 396 aaKnown RBP16.08■□□□□ 0.16
SND1-203ENST00000463020 TFE3P19532 575 aaPredicted RBP16.08■□□□□ 0.16
SND1-203ENST00000463020 TGM2P21980 687 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 VASPP50552 380 aaPredicted RBP16.08■□□□□ 0.16
SND1-203ENST00000463020 SULT2A1Q06520 285 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 FAM46CQ5VWP2 391 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 GJB7Q6PEY0 223 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 TMEM110Q86TL2 294 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 DEFB106AQ8N104 65 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 OR2A12Q8NGT7 310 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 SPATA20Q8TB22 786 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 TRIM44Q96DX7 344 aaPredicted RBP16.08■□□□□ 0.16
SND1-203ENST00000463020 PRR11Q96HE9 360 aaPredicted RBP16.08■□□□□ 0.16
SND1-203ENST00000463020 VCPIP1Q96JH7 1222 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 RPRD1AQ96P16 312 aaPredicted RBP16.08■□□□□ 0.16
SND1-203ENST00000463020 SLC2A13Q96QE2 648 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 DDIT4Q9NX09 232 aa16.08■□□□□ 0.16
SND1-203ENST00000463020 K7ESM1 405 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 ALOX15BO15296 676 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 KLK10O43240 276 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 KRT5P13647 590 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 ZNF18P17022 549 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 RRM1P23921 792 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 NNMTP40261 264 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 TMPRSS3P57727 454 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 GCNT1Q02742 428 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 LRRC63Q05C16 580 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 PDCLQ13371 301 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 ALFQ53S48 1182 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 KIAA1614Q5VZ46 1190 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 CRTC1Q6UUV9 634 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 LINGO4Q6UY18 593 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 ABI3BPQ7Z7G0 1075 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 DSG4Q86SJ6 1040 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 HORMAD1Q86X24 394 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 ATP6V0D2Q8N8Y2 350 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 EHBP1Q8NDI1 1231 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 ATXN7L3BQ96GX2 97 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 BMFQ96LC9 184 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 CPXM1Q96SM3 734 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 INTS2Q9H0H0 1204 aaKnown RBP16.07■□□□□ 0.16
SND1-203ENST00000463020 TNKS2Q9H2K2 1166 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 TMPRSS4Q9NRS4 437 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 GPR27Q9NS67 375 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.07■□□□□ 0.16
SND1-203ENST00000463020 SLC25A13Q9UJS0 675 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 VPS28Q9UK41 221 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 SATB2Q9UPW6 733 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
SND1-203ENST00000463020 GOLGA6L4A6NEF3 574 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 POM121BA6NF01 834 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 C1QTNF3-AMACRE9PGA6 284 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 KPNA3O00505 521 aaPredicted RBP16.06■□□□□ 0.16
SND1-203ENST00000463020 SART1O43290 800 aaKnown RBP16.06■□□□□ 0.16
SND1-203ENST00000463020 MAGEC1O60732 1142 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 ZNF821O75541 412 aaPredicted RBP16.06■□□□□ 0.16
SND1-203ENST00000463020 BMP6P22004 513 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 CHRNA3P32297 505 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 NUDT1P36639 197 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 ACADSBP45954 432 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 LSSP48449 732 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 FZD2Q14332 565 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 TMEM259Q4ZIN3 620 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 C3orf38Q5JPI3 329 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 RABGAP1LQ5R372 815 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 TTI2Q6NXR4 508 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 GUSBP11Q6P575 273 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 Q6ZSR6 202 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 ZNF683Q8IZ20 524 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 FAM181AQ8N9Y4 354 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 IFI44Q8TCB0 444 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 GRIN3AQ8TCU5 1115 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 STK32AQ8WU08 396 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 KCNE4Q8WWG9 221 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 ZNF606Q8WXB4 792 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 DEPDC7Q96QD5 511 aa16.06■□□□□ 0.16
SND1-203ENST00000463020 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms