RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 A0A1B0GTQ1 180 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 FAM47DPA6NHR8 397 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 C2CD4BA6NLJ0 364 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 LGALS16A8MUM7 142 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 E9PAM4 449 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 C1QTNF3-AMACRE9PGA6 284 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 GOLGA8SH3BPF8 625 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 KCNK3O14649 394 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 PLRG1O43660 514 aaKnown RBP9.38□□□□□ -0.91
BRCA1-207ENST00000461798 SNAP91O60641 907 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 ZMPSTE24O75844 475 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 WNT1P04628 370 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 CAPNS1P04632 268 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 RHOCP08134 193 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 CD38P28907 300 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 ADRA1BP35368 520 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 GRK6P43250 576 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 PTPN9P43378 593 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 C21orf59P57076 290 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 MYL5Q02045 173 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 CNTN1Q12860 1018 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 NCAPHQ15003 741 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 SYCP1Q15431 976 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 STX1AQ16623 288 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 CCDC14Q49A88 953 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 ACCSLQ4AC99 568 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 NEK5Q6P3R8 708 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 STRADAQ7RTN6 431 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 IQCHQ86VS3 1027 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 TRIM69Q86WT6 500 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 PHF13Q86YI8 300 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-207ENST00000461798 MFSD2AQ8NA29 543 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 DCAF4L2Q8NA75 395 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 ANKRD20A12PQ8NF67 263 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 OR2A12Q8NGT7 310 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 PIP4K2CQ8TBX8 421 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 RHBDD1Q8TEB9 315 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 RXFP2Q8WXD0 754 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 CFAP57Q96MR6 1250 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 SLC6A18Q96N87 628 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 ERGIC2Q96RQ1 377 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 PCDHB18PQ96TA0 734 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 ELF4Q99607 663 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-207ENST00000461798 ZYG11BQ9C0D3 744 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 MUC3BQ9H195 1237 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 OSBPL2Q9H1P3 480 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 HSD3B7Q9H2F3 369 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 ERVMER34-1Q9H9K5 563 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 NLRC4Q9NPP4 1024 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 TMPRSS4Q9NRS4 437 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 VPS51Q9UID3 782 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 KLK13Q9UKR3 277 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 DMTF1Q9Y222 760 aa9.38□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3DA0A087WVF3 549 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3IA0A087WXS9 549 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3EA0A087X179 549 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3KA0A087X1G2 549 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3FA6NER0 549 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3LB9A6J9 549 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 GOLGA6L22H0YM25 854 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 K7ERQ8 282 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 WNT9AO14904 365 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 SMAD6O43541 496 aaKnown RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 RNGTTO60942 597 aaKnown RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 SRGAP2O75044 1071 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 RTN2O75298 545 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 ZNF821O75541 412 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 MBD3O95983 291 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3HP0C7X1 549 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 OR1E1P30953 314 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 CHRNA3P32297 505 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 RXRGP48443 463 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 CCT8P50990 548 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 METAP1P53582 386 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TAS2R38P59533 333 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 CCDC15Q0P6D6 951 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 OVGP1Q12889 678 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 SHBQ15464 509 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 ARL13BQ3SXY8 428 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 MANEALQ5VSG8 457 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 AGBL4Q5VU57 503 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3GQ6DHY5 549 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3CQ6IPX1 549 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 NAPEPLDQ6IQ20 393 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 RETSATQ6NUM9 610 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 LAYNQ6UX15 382 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 CCNI2Q6ZMN8 369 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 Q6ZVU0 165 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 ADAT2Q7Z6V5 191 aaKnown RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 PRPF39Q86UA1 669 aaKnown RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 FAM131BQ86XD5 332 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 PLPP6Q8IY26 295 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TBC1D3Q8IZP1 549 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 EMC1Q8N766 993 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 ATP11CQ8NB49 1132 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 NEK11Q8NG66 645 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 SLC30A5Q8TAD4 765 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 NTAN1Q96AB6 310 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 SERAC1Q96JX3 654 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms