RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ANPEPP15144 967 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 DAOAP59103 153 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 CRHR2Q13324 411 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 DDR2Q16832 855 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 MCUQ8NE86 351 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 C10orf82Q8WW14 230 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 C17orf50Q8WW18 174 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 TMEM209Q96SK2 561 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 EBF3Q9H4W6 596 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 LRRC40Q9H9A6 602 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 PFDN4Q9NQP4 134 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 MAN1C1Q9NR34 630 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 SPECC1L-ADORA2AF8WAN1 911 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 CFLARO15519 480 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 DNAJC6O75061 913 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 DAB1O75553 588 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 ENDOD1O94919 500 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 CPB1P15086 417 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 SPRP35270 261 aaPredicted RBP15.69■□□□□ 0.1
LMNB1-203ENST00000460265 LRRC8BQ6P9F7 803 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 C4orf22Q6V702 233 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 CCDC80Q76M96 950 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.69■□□□□ 0.15e-8■■■■■ 60.8
LMNB1-203ENST00000460265 C3orf58Q8NDZ4 430 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 LRRC39Q96DD0 335 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 DGCR14Q96DF8 476 aaKnown RBP15.69■□□□□ 0.1
LMNB1-203ENST00000460265 MOCOSQ96EN8 888 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 GDAP2Q9NXN4 497 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.69■□□□□ 0.1
LMNB1-203ENST00000460265 SMIM31A0A1B0GVY4 71 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 TMEM221A6NGB7 291 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 MEI4A8MW99 385 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 VAPBO95292 243 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 PAX3P23760 479 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 YWHAHQ04917 246 aaPredicted RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 DUS1LQ6P1R4 473 aaKnown RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 GLB1LQ6UWU2 654 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 PACS1Q6VY07 963 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 B3GNT6Q6ZMB0 384 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 CERS2Q96G23 380 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 TLE6Q9H808 572 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 RBM22Q9NW64 420 aaKnown RBP eCLIP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 EURLQ9NYK6 297 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 TTC3P53804 2025 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 MANSC4A6NHS7 340 aaPredicted RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 BOLA2-SMG1P6H3BVE0 249 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 C2CD2LO14523 706 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 FBXO21O94952 628 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 STAU1O95793 577 aaKnown RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 ATXN3P54252 364 aaPredicted RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 EFEMP1Q12805 493 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 DCTN2Q13561 401 aaKnown RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 RBM44Q6ZP01 1051 aaKnown RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 PSTKQ8IV42 348 aaKnown RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 SEPT5Q99719 369 aaPredicted RBP15.68■□□□□ 0.1
LMNB1-203ENST00000460265 NDUFA13Q9P0J0 144 aa15.68■□□□□ 0.1
LMNB1-203ENST00000460265 PDE5AO76074 875 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 KCNE1P15382 129 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 PGAM1P18669 254 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 CDK16Q00536 496 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 PLOD1Q02809 727 aaPredicted RBP15.67■□□□□ 0.1
LMNB1-203ENST00000460265 TAZQ16635 292 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 MTBPQ96DY7 904 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 TAS2R1Q9NYW7 299 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 F9P00740 461 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 MAXP61244 160 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 CDC16Q13042 620 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 UBAP2LQ14157 1087 aaKnown RBP15.67■□□□□ 0.1
LMNB1-203ENST00000460265 KCNA10Q16322 511 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 KIAA0319Q5VV43 1072 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 C1orf146Q5VVC0 180 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 SPON2Q9BUD6 331 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 GOLGA4Q13439 2230 aaKnown RBP15.67■□□□□ 0.1
LMNB1-203ENST00000460265 ARID2Q68CP9 1835 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 A0A096LPK6 155 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 MBLAC1A4D2B0 266 aaPredicted RBP15.67■□□□□ 0.1
LMNB1-203ENST00000460265 RALBP11234 206 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 SLC1A6P48664 564 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 CTBP1Q13363 440 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 MGAT5BQ3V5L5 792 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 MMEL1Q495T6 779 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 VWA5B1Q5TIE3 1220 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 RINLQ6ZS11 566 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 C10orf107Q8IVU9 208 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 EFCAB3Q8N7B9 438 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 B3GALT6Q96L58 329 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 PHF12Q96QT6 1004 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 NPY6RQ99463 290 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 CORO1BQ9BR76 489 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 FICDQ9BVA6 458 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 CNGB3Q9NQW8 809 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 GABRQQ9UN88 632 aa15.67■□□□□ 0.1
LMNB1-203ENST00000460265 HACD1B0YJ81 288 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 E9PBE3 544 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 SCAMP3O14828 347 aaKnown RBP15.66■□□□□ 0.1
LMNB1-203ENST00000460265 BUD23O43709 281 aaKnown RBP15.66■□□□□ 0.1
LMNB1-203ENST00000460265 KLHL41O60662 606 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 CPA3P15088 417 aa15.66■□□□□ 0.1
LMNB1-203ENST00000460265 WARSP23381 471 aaKnown RBP15.66■□□□□ 0.1
LMNB1-203ENST00000460265 GP5P40197 560 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms