RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TPSB2P20231 275 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 AIF1P55008 147 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 CCDC15Q0P6D6 951 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 TPSAB1Q15661 275 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 PGS1Q32NB8 556 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 DUSP28Q4G0W2 176 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 FAM126BQ8IXS8 530 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 PCDH20Q8N6Y1 951 aaKnown RBP14.98□□□□□ -0.01
PTPRU-205ENST00000460170 NETO2Q8NC67 525 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 ZSCAN18Q8TBC5 510 aaPredicted RBP14.98□□□□□ -0.01
PTPRU-205ENST00000460170 OSCP1Q8WVF1 389 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 KCTD4Q8WVF5 259 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 CATSPERZQ9NTU4 200 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 LZTS1Q9Y250 596 aa14.98□□□□□ -0.01
PTPRU-205ENST00000460170 HALP42357 657 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 TUFMP49411 452 aaKnown RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 RAD23AP54725 363 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 RAB10P61026 200 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 UBAP2LQ14157 1087 aaKnown RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 ADGRD1Q6QNK2 874 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 ECHDC2Q86YB7 292 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 IMPAD1Q9NX62 359 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 RCOR3Q9P2K3 495 aaPredicted RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 PLLPQ9Y342 182 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 PAPSS1O43252 624 aaPredicted RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 MLNP12872 115 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 ADRA1BP35368 520 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 FAM98BQ52LJ0 330 aaKnown RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 DRICH1Q6PGQ1 229 aaPredicted RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 CLNKQ7Z7G1 428 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 SLC51AQ86UW1 340 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 BDH2Q9BUT1 245 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 EXOSC4Q9NPD3 245 aaKnown RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 FAM50BQ9Y247 325 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 BCLAF3A2AJT9 711 aaKnown RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 CCDC154A6NI56 674 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 FOXO6A8MYZ6 492 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 CSTF3Q12996 717 aaKnown RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 MAD2L1Q13257 205 aaPredicted RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 ZDHHC24Q6UX98 284 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 C10orf107Q8IVU9 208 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 UROC1Q96N76 676 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 PDZD7Q9H5P4 517 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 PTPRHQ9HD43 1115 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 RABGEF1Q9UJ41 708 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 PNMA8BQ9ULN7 279 aaPredicted RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 ST3GAL5Q9UNP4 418 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 SMIM28A0A1B0GU29 152 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 RGSL1A5PLK6 1076 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 ZMPSTE24O75844 475 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 LDLRP01130 860 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 NEK2P51955 445 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 BNIP1Q12981 228 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 MAP2K5Q13163 448 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 STAG3L4Q8TBR4 150 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 LPPQ93052 612 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 RMND5BQ96G75 393 aaPredicted RBP14.97□□□□□ -0.01
PTPRU-205ENST00000460170 MAN1C1Q9NR34 630 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 ZDHHC18Q9NUE0 388 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.97□□□□□ -0.012e-6■■□□□ 11.7
PTPRU-205ENST00000460170 FBXO5Q9UKT4 447 aa14.97□□□□□ -0.01
PTPRU-205ENST00000460170 KDM1AO60341 852 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 ZNF682O95780 498 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 DARSP14868 501 aaKnown RBP14.96□□□□□ -0.01
PTPRU-205ENST00000460170 ANKRD22Q5VYY1 191 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 CMC1Q7Z7K0 106 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 FITM2Q8N6M3 262 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 RDH11Q8TC12 318 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 LYPLA1O75608 230 aaPredicted RBP14.96□□□□□ -0.01
PTPRU-205ENST00000460170 CD48P09326 243 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 LRPAP1P30533 357 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 TRAF2Q12933 501 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 PFKFB4Q16877 469 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 RAP1GAP2Q684P5 730 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 TDRPQ86YL5 185 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 BHLHE22Q8NFJ8 381 aaPredicted RBP14.96□□□□□ -0.01
PTPRU-205ENST00000460170 TRAPPC9Q96Q05 1148 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 MRPL57Q9BQC6 102 aaKnown RBP14.96□□□□□ -0.01
PTPRU-205ENST00000460170 HGH1Q9BTY7 390 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 C15orf38-AP3S2A0A0A6YYH1 394 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 SMIM35A0A1B0GVV1 85 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 F8W810 466 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 PAX3P23760 479 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 CDC25CP30307 473 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 LIPMQ5VYY2 423 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 ARPINQ7Z6K5 226 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 ITIH5Q86UX2 942 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 LRRC15Q8TF66 581 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 OMDQ99983 421 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 MRPL9Q9BYD2 267 aaKnown RBP14.96□□□□□ -0.01
PTPRU-205ENST00000460170 OSBPL7Q9BZF2 842 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 ZYG11BQ9C0D3 744 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 MGAT4DA6NG13 374 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 LBPP18428 481 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 IL2P60568 153 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 PMF1Q6P1K2 205 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 POTEHQ6S545 545 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 SLC26A9Q7LBE3 791 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 MILR1Q7Z6M3 343 aa14.96□□□□□ -0.01
PTPRU-205ENST00000460170 ZNF214Q9UL59 606 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms