RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 TDGF1P13385 188 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 FNTBP49356 437 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 NRLP54845 237 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 DMWDQ09019 674 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 SERINC3Q13530 473 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 LLGL1Q15334 1064 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 AFMIDQ63HM1 303 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 NT5DC3Q86UY8 548 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 CCDC50Q8IVM0 306 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 KATNAL2Q8IYT4 538 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 SH2D3CQ8N5H7 860 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 PCDH19Q8TAB3 1148 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 UBE2Q2Q8WVN8 375 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 KRT35Q92764 455 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 RNF157Q96PX1 679 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 LRRC19Q9H756 370 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 CD248Q9HCU0 757 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 PRSS16Q9NQE7 514 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 TRMT1Q9NXH9 659 aaKnown RBP11.09□□□□□ -0.63
CCDC12-204ENST00000460035 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 PCDHA3Q9Y5H8 950 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 TP53BP1Q12888 1972 aaPredicted RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 EDDM13A0A1B0GTR0 161 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 TARSL2A2RTX5 802 aaKnown RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 CCDC66A2RUB6 948 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 C3orf70A6NLC5 250 aaPredicted RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 AXIN1O15169 862 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 SMAD6O43541 496 aaKnown RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 ATP9BO43861 1147 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 SIN3BO75182 1162 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 C7P10643 843 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 SRCP12931 536 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 VAV1P15498 845 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 CTNNA2P26232 953 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 SERPINB6P35237 376 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 CETN2P41208 172 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 RECQLP46063 649 aaPredicted RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 MARCKSL1P49006 195 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 RWDD2BP57060 319 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 GEMIN4P57678 1058 aaKnown RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 ARF5P84085 180 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 TAZQ16635 292 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 HNRNPA1L2Q32P51 320 aaKnown RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 ZNF528Q3MIS6 628 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 KAZNQ674X7 775 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 MFSD7Q6UXD7 560 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 KIAA1324Q6UXG2 1013 aaKnown RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 SPOCD1Q6ZMY3 1216 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 TMPRSS6Q8IU80 811 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 TP53INP2Q8IXH6 220 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 STK40Q8N2I9 435 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 NPWQ8N729 165 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 PQLC3Q8N755 202 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 UBL4BQ8N7F7 174 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 PRSS33Q8NF86 280 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 EXD1Q8NHP7 514 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 NELL1Q92832 810 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 ATOH1Q92858 354 aaPredicted RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 PTPRN2Q92932 1015 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 ALS2CR12Q96Q35 445 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 FAM126AQ9BYI3 521 aaPredicted RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 SLC6A17Q9H1V8 727 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 PRDM16Q9HAZ2 1276 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 IPO11Q9UI26 975 aaKnown RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 PACSIN2Q9UNF0 486 aaPredicted RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 FCF1Q9Y324 198 aaKnown RBP11.08□□□□□ -0.64
CCDC12-204ENST00000460035 ACTL7AQ9Y615 435 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 CAPN6Q9Y6Q1 641 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 CACNA1EQ15878 2313 aa11.08□□□□□ -0.64
CCDC12-204ENST00000460035 CCDC163A0A0D9SF12 145 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 ZSCAN5CA6NGD5 496 aaPredicted RBP11.07□□□□□ -0.64
CCDC12-204ENST00000460035 J3KR12 359 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 APOL1O14791 398 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 RNASEH1O60930 286 aaKnown RBP11.07□□□□□ -0.64
CCDC12-204ENST00000460035 ACADMP11310 421 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 KRT10P13645 584 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 ZFXP17010 805 aaPredicted RBP11.07□□□□□ -0.64
CCDC12-204ENST00000460035 GABRG2P18507 467 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 NDUFV2P19404 249 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 CDKN2BP42772 138 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 SERPINH1P50454 418 aaKnown RBP11.07□□□□□ -0.64
CCDC12-204ENST00000460035 CLCN6P51797 869 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 PTPN5P54829 565 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 DYNLT1P63172 113 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 TCF15Q12870 199 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 CAMK2GQ13555 558 aaPredicted RBP11.07□□□□□ -0.64
CCDC12-204ENST00000460035 TFDP2Q14188 446 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 PAFAH1B3Q15102 231 aaKnown RBP11.07□□□□□ -0.64
CCDC12-204ENST00000460035 C9orf64Q5T6V5 341 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 NCBP2-AS2Q69YL0 99 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 ARHGAP36Q6ZRI8 547 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 Q6ZVU0 165 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 LONP2Q86WA8 852 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 RASSF3Q86WH2 238 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 CACUL1Q86Y37 369 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 ARHGAP12Q8IWW6 846 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 RYBPQ8N488 228 aaPredicted RBP11.07□□□□□ -0.64
CCDC12-204ENST00000460035 MDGA1Q8NFP4 955 aa11.07□□□□□ -0.64
CCDC12-204ENST00000460035 OR2T3Q8NH03 318 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms