RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 TP53INP2Q8IXH6 220 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 LZTR1Q8N653 840 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 NETO2Q8NC67 525 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 KCTD6Q8NC69 237 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 MDGA1Q8NFP4 955 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 TSTD1Q8NFU3 115 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 NELL1Q92832 810 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 HES6Q96HZ4 224 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 RPL10LQ96L21 214 aaKnown RBP9.36□□□□□ -0.91
PCCB-202ENST00000459873 OLFM3Q96PB7 478 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 RNF157Q96PX1 679 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 ALS2CR12Q96Q35 445 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 HERPUD2Q9BSE4 406 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 SLC39A8Q9C0K1 460 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCCB-202ENST00000459873 PCDHA3Q9Y5H8 950 aa9.36□□□□□ -0.91
PCCB-202ENST00000459873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCCB-202ENST00000459873 EDDM13A0A1B0GTR0 161 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 ARHGAP42A6NI28 874 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 USP27XA6NNY8 438 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 TTC34A8MYJ7 566 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 K7ERQ8 282 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 ZSCAN12O43309 604 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 SMAD6O43541 496 aaKnown RBP9.35□□□□□ -0.91
PCCB-202ENST00000459873 KDELR3O43731 214 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 PRAMEF11O60813 436 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 SIN3BO75182 1162 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 ZNF821O75541 412 aaPredicted RBP9.35□□□□□ -0.91
PCCB-202ENST00000459873 TMCC1O94876 653 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 PEX11BO96011 259 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 MT-CO1P00395 513 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 VAV1P15498 845 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 GABRG2P18507 467 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 NDUFV2P19404 249 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 HOXA6P31267 233 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 PAPOLAP51003 745 aaKnown RBP9.35□□□□□ -0.91
PCCB-202ENST00000459873 RWDD2BP57060 319 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 GEMIN4P57678 1058 aaKnown RBP9.35□□□□□ -0.91
PCCB-202ENST00000459873 DMWDQ09019 674 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 TCF15Q12870 199 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 ELAVL3Q14576 367 aaKnown RBP9.35□□□□□ -0.91
PCCB-202ENST00000459873 TFDP3Q5H9I0 405 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 ANO7Q6IWH7 933 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 RETSATQ6NUM9 610 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 TSSK4Q6SA08 328 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 ATPAF2Q8N5M1 289 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 TRIM58Q8NG06 486 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 NUP205Q92621 2012 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
PCCB-202ENST00000459873 ZNF419Q96HQ0 510 aaPredicted RBP9.35□□□□□ -0.91
PCCB-202ENST00000459873 SPON2Q9BUD6 331 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 CEP44Q9C0F1 390 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 MKRN2Q9H000 416 aaKnown RBP9.35□□□□□ -0.91
PCCB-202ENST00000459873 MTG2Q9H4K7 406 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 FBRSQ9HAH7 460 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 DTLQ9NZJ0 730 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 SLCO3A1Q9UIG8 710 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 AMFRQ9UKV5 643 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 PLA2G4CQ9UP65 541 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 SLC8A2Q9UPR5 921 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 ACTL7AQ9Y615 435 aa9.35□□□□□ -0.91
PCCB-202ENST00000459873 CCDC163A0A0D9SF12 145 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 J3KR12 359 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 DFFAO00273 331 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 APOL1O14791 398 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 MAFKO60675 156 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 MAP3K6O95382 1288 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 SP9P0CG40 484 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 KRT10P13645 584 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 PECAM1P16284 738 aaPredicted RBP9.34□□□□□ -0.91
PCCB-202ENST00000459873 GARSP41250 739 aaKnown RBP9.34□□□□□ -0.91
PCCB-202ENST00000459873 COPS2P61201 443 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 DYNLT1P63172 113 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 IL10RBQ08334 325 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 ADCY2Q08462 1091 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 C9orf64Q5T6V5 341 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 SDE2Q6IQ49 451 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 LEKR1Q6ZMV7 388 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 BBS12Q6ZW61 710 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 WDR5BQ86VZ2 330 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 ZNF354CQ86Y25 554 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 CACUL1Q86Y37 369 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 RFX6Q8HWS3 928 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 CCDC50Q8IVM0 306 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 CAMKK1Q8N5S9 505 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 PCDH20Q8N6Y1 951 aaKnown RBP9.34□□□□□ -0.91
PCCB-202ENST00000459873 UBL4BQ8N7F7 174 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 ATP11CQ8NB49 1132 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 OR2T3Q8NH03 318 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.34□□□□□ -0.91
PCCB-202ENST00000459873 CASKIN2Q8WXE0 1202 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 PTPRN2Q92932 1015 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 VOPP1Q96AW1 172 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 ISG20Q96AZ6 181 aaKnown RBP9.34□□□□□ -0.91
PCCB-202ENST00000459873 HDAC11Q96DB2 347 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 MRGPRX1Q96LB2 322 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 PRRX2Q99811 253 aa9.34□□□□□ -0.91
PCCB-202ENST00000459873 FAM126AQ9BYI3 521 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms