RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 KDSRQ06136 332 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 KLC1Q07866 573 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 MPP3Q13368 585 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 ITGA9Q13797 1035 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 RCN2Q14257 317 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 ARHGAP36Q6ZRI8 547 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 SCAMP5Q8TAC9 235 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 URGCPQ8TCY9 931 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 PPP4R1Q8TF05 950 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 RSPH1Q8WYR4 309 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 C1orf21Q9H246 121 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 FAM96AQ9H5X1 160 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 ZFYVE28Q9HCC9 887 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 CREBZFQ9NS37 354 aa18.72■□□□□ 0.59
SEMA3B-209ENST00000456560 CEP350Q5VT06 3117 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 A0A0U1RQF3 1178 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 IRAK2O43187 625 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 TIMM44O43615 452 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 KRT36O76013 467 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 PSMG1O95456 288 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 RPLP2P05387 115 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 PAX3P23760 479 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 HOXC13P31276 330 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 ABCG1P45844 678 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 DLG2Q15700 870 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 LINC00523Q86TU6 105 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 ACVR1CQ8NER5 493 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 HAPLN3Q96S86 360 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 CAB39LQ9H9S4 337 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 IARS2Q9NSE4 1012 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 APOBEC2Q9Y235 224 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 PATJQ8NI35 1801 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 NLRC5Q86WI3 1866 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 PTPRDP23468 1912 aa18.71■□□□□ 0.59
SEMA3B-209ENST00000456560 C2P06681 752 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 SRGAP2BP0DMP2 458 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 VHLP40337 213 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 TUBP50607 506 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 IRF9Q00978 393 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 TUSC3Q13454 348 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 BRMS1LQ5PSV4 323 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 MANEALQ5VSG8 457 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 RWDD4Q6NW29 188 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 TMEM154Q6P9G4 183 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 TNS4Q8IZW8 715 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 SPDYE1Q8NFV5 336 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 USP33Q8TEY7 942 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 ZNF333Q96JL9 665 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 NMRK1Q9NWW6 199 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 MAGED2Q9UNF1 606 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 PCDHB12Q9Y5F1 795 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 TM7SF2O76062 418 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 KLHL2O95198 593 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 THPOP40225 353 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 NOGQ13253 232 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 LBRQ14739 615 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 RCN1Q15293 331 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 DNAL1Q4LDG9 190 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 OVOS1Q6IE37 1185 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 HASPINQ8TF76 798 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 VPS39Q96JC1 886 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 FCRL5Q96RD9 977 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 IL12RB2Q99665 862 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 SIK2Q9H0K1 926 aa18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 TDRD15B5MCY1 1934 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 FNDC1Q4ZHG4 1894 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-209ENST00000456560 F8W8V4 182 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 TNFRSF10BO14763 440 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 PAGE1O75459 146 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 MYL4P12829 197 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 HTR7P34969 479 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 CPOXP36551 454 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 LPIN1Q14693 890 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 MAPRE1Q15691 268 aaKnown RBP18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 NAPRTQ6XQN6 538 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 SCUBE1Q8IWY4 988 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 TRIB2Q92519 343 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 SUSD3Q96L08 255 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 UROC1Q96N76 676 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 GPR22Q99680 433 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 ABCC13Q9NSE7 274 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 AAR2Q9Y312 384 aaKnown RBP18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 DFFAO00273 331 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 ITGB1P05556 798 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 HADHAP40939 763 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 PGFP49763 221 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 PDPK2PQ6A1A2 396 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 NET1Q7Z628 596 aaPredicted RBP18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 THEM5Q8N1Q8 247 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 SPATA22Q8NHS9 363 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 ZNF419Q96HQ0 510 aaPredicted RBP18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 ARHGAP39Q9C0H5 1083 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 SMOC2Q9H3U7 446 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 SPC25Q9HBM1 224 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 GLOD4Q9HC38 313 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 NSMCE4AQ9NXX6 385 aa18.69■□□□□ 0.58
SEMA3B-209ENST00000456560 TMEM114B3SHH9 223 aa18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 FGF10O15520 208 aaPredicted RBP18.68■□□□□ 0.58
SEMA3B-209ENST00000456560 MAFKO60675 156 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms