RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 ZNF177Q13360 481 aaPredicted RBP23.83■■□□□ 1.41
PTPRA-208ENST00000455631 CRTC1Q6UUV9 634 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 RBM44Q6ZP01 1051 aaKnown RBP23.83■■□□□ 1.41
PTPRA-208ENST00000455631 EFL1Q7Z2Z2 1120 aaKnown RBP23.83■■□□□ 1.41
PTPRA-208ENST00000455631 ABI3BPQ7Z7G0 1075 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 SH2D3CQ8N5H7 860 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 OR52K2Q8NGK3 314 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 GRAMD1AQ96CP6 724 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 ALG14Q96F25 216 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 RPRD1AQ96P16 312 aaPredicted RBP23.83■■□□□ 1.41
PTPRA-208ENST00000455631 NT5C1BQ96P26 610 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 PRMT1Q99873 361 aaKnown RBP23.83■■□□□ 1.41
PTPRA-208ENST00000455631 DYRK4Q9NR20 520 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 SLC12A6Q9UHW9 1150 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 VPS28Q9UK41 221 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 CDRT15L2A8MXV6 281 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 NDUFA8P51970 172 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 PITX1P78337 314 aaPredicted RBP23.82■■□□□ 1.4
PTPRA-208ENST00000455631 CLN3Q13286 438 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 SEL1L3Q68CR1 1132 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 BEND5Q7L4P6 421 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 PPM1KQ8N3J5 372 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 ARL14Q8N4G2 192 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 KAT5Q92993 513 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 PRR11Q96HE9 360 aaPredicted RBP23.82■■□□□ 1.4
PTPRA-208ENST00000455631 FEM1AQ9BSK4 669 aa23.82■■□□□ 1.4
PTPRA-208ENST00000455631 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.82■■□□□ 1.4
PTPRA-208ENST00000455631 FARP1Q9Y4F1 1045 aaPredicted RBP23.82■■□□□ 1.4
PTPRA-208ENST00000455631 KIF26BQ2KJY2 2108 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 H3BM21 787 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 IGLV3-25P01717 112 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 C6orf132Q5T0Z8 1188 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 FBXL22Q6P050 247 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 SLC35C1Q96A29 364 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 CCDC114Q96M63 670 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 FAM204AQ9H8W3 233 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 POPDC2Q9HBU9 364 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.81■■□□□ 1.4
PTPRA-208ENST00000455631 NCKIPSDQ9NZQ3 722 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 IL17BQ9UHF5 180 aa23.81■■□□□ 1.4
PTPRA-208ENST00000455631 ZFR2Q9UPR6 939 aaKnown RBP23.81■■□□□ 1.4
PTPRA-208ENST00000455631 SYNJ2BP-COX16A0A087WUM0 186 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 NME1P15531 152 aaKnown RBP23.8■■□□□ 1.4
PTPRA-208ENST00000455631 CHRNA3P32297 505 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 ACADSBP45954 432 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 IRAK1P51617 712 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 PKP1Q13835 747 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 PARGQ86W56 976 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 DCP2Q8IU60 420 aaKnown RBP23.8■■□□□ 1.4
PTPRA-208ENST00000455631 FAM174AQ8TBP5 190 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 TSG101Q99816 390 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 PIEZO2Q9H5I5 2752 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 COX16Q9P0S2 106 aa23.8■■□□□ 1.4
PTPRA-208ENST00000455631 ARMCX3Q9UH62 379 aaPredicted RBP23.8■■□□□ 1.4
PTPRA-208ENST00000455631 TNFSF15O95150 251 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 CSF2P04141 144 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 SRCP12931 536 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 GPD2P43304 727 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 RPL34P49207 117 aaKnown RBP23.79■■□□□ 1.4
PTPRA-208ENST00000455631 MAPK8IP2Q13387 824 aaPredicted RBP23.79■■□□□ 1.4
PTPRA-208ENST00000455631 FZD2Q14332 565 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 DEFB133Q30KQ1 61 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 KYAT3Q6YP21 454 aaKnown RBP23.79■■□□□ 1.4
PTPRA-208ENST00000455631 KRBA2Q6ZNG9 492 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 ATP11CQ8NB49 1132 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 TPCN2Q8NHX9 752 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 WDR36Q8NI36 951 aaKnown RBP23.79■■□□□ 1.4
PTPRA-208ENST00000455631 CCNL2Q96S94 520 aaPredicted RBP23.79■■□□□ 1.4
PTPRA-208ENST00000455631 MUC3BQ9H195 1237 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 GPR27Q9NS67 375 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 VANGL2Q9ULK5 521 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 TRPM6Q9BX84 2022 aa23.79■■□□□ 1.4
PTPRA-208ENST00000455631 SLC2A3P11169 496 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 FMO5P49326 533 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 YWHAZP63104 245 aaKnown RBP23.78■■□□□ 1.4
PTPRA-208ENST00000455631 DRAP1Q14919 205 aaPredicted RBP23.78■■□□□ 1.4
PTPRA-208ENST00000455631 NR0B2Q15466 257 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 ARL13BQ3SXY8 428 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 TMEM259Q4ZIN3 620 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 ERN2Q76MJ5 926 aaKnown RBP23.78■■□□□ 1.4
PTPRA-208ENST00000455631 CLEC14AQ86T13 490 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 EXD3Q8N9H8 876 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 TMIEQ8NEW7 156 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 OR2A12Q8NGT7 310 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 GRIN3AQ8TCU5 1115 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 BMFQ96LC9 184 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 SYNDIG1Q9H7V2 258 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 DDIT4Q9NX09 232 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 HS3ST2Q9Y278 367 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 OR51B4Q9Y5P0 310 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 CSNK1G3Q9Y6M4 447 aa23.78■■□□□ 1.4
PTPRA-208ENST00000455631 EME2A4GXA9 379 aaPredicted RBP23.77■■□□□ 1.4
PTPRA-208ENST00000455631 POM121BA6NF01 834 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 E5RJQ4 531 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 RNF103O00237 685 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 MUSKO15146 869 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 AQP9O43315 295 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 TCEA3O75764 348 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 MT-CO1P00395 513 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 PRNPP04156 253 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms