RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 TMCO4Q5TGY1 634 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 ANKRD20A1Q5TYW2 823 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 ANKRD20A3Q5VUR7 823 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 ALG1LQ6GMV1 187 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 PTCRAQ6ISU1 281 aaPredicted RBP16.99■□□□□ 0.31
LINC00963-208ENST00000454968 GSTA5Q7RTV2 222 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 PRUNE1Q86TP1 453 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 C12orf40Q86WS4 652 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 APCDD1Q8J025 514 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 CPA6Q8N4T0 437 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 BHMTQ93088 406 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 PNKPQ96T60 521 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 RHOXF2Q9BQY4 288 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 ATP13A1Q9HD20 1204 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 GRHL1Q9NZI5 618 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 WHRNQ9P202 907 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 ATP8A1Q9Y2Q0 1164 aa16.99■□□□□ 0.31
LINC00963-208ENST00000454968 LOC730098B7Z3J9 87 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 SEC31AO94979 1220 aaKnown RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 IFNB1P01574 187 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 PABPC1P11940 636 aaKnown RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 GLDCP23378 1020 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 GDI1P31150 447 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 CD68P34810 354 aaPredicted RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 RPL21P46778 160 aaKnown RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 RENBPP51606 427 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 SLC10A7Q0GE19 358 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 CBLBQ13191 982 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 FUT11Q495W5 492 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 PITRM1Q5JRX3 1037 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 IL31Q6EBC2 164 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 ADIPOR2Q86V24 386 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 CCDC117Q8IWD4 279 aaPredicted RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 YAF2Q8IY57 180 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 ST13P5Q8NFI4 369 aaPredicted RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 CCDC110Q8TBZ0 833 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 CASKIN2Q8WXE0 1202 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 PPM1EQ8WY54 764 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 TTC17Q96AE7 1141 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 XPO6Q96QU8 1125 aaKnown RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 C2orf49Q9BVC5 232 aaPredicted RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 FAM129AQ9BZQ8 928 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 MUC3BQ9H195 1237 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 EPC1Q9H2F5 836 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 KCNK12Q9HB15 430 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 SP110Q9HB58 689 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 ABCB8Q9NUT2 735 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 VPS51Q9UID3 782 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 GGA2Q9UJY4 613 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 FAM50BQ9Y247 325 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 FARP1Q9Y4F1 1045 aaPredicted RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 V9GYY5 206 aaPredicted RBP16.98■□□□□ 0.31
LINC00963-208ENST00000454968 F5P12259 2224 aa16.98■□□□□ 0.31
LINC00963-208ENST00000454968 TULP3O75386 442 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 STK10O94804 968 aaKnown RBP16.97■□□□□ 0.31
LINC00963-208ENST00000454968 ECHS1P30084 290 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 GJA4P35212 333 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 OPRD1P41143 372 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 GUCY2DQ02846 1103 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 SLC20A2Q08357 652 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 NR1H3Q13133 447 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 TRADDQ15628 312 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 KCTD19Q17RG1 926 aaPredicted RBP16.97■□□□□ 0.31
LINC00963-208ENST00000454968 ITPRIPL2Q3MIP1 535 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 TMEM215Q68D42 235 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 AHI1Q8N157 1196 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 MAFAQ8NHW3 353 aaPredicted RBP16.97■□□□□ 0.31
LINC00963-208ENST00000454968 WFIKKN2Q8TEU8 576 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 PSKH2Q96QS6 385 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 GORASP1Q9BQQ3 440 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 EPB41L5Q9HCM4 733 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 GTSE1Q9NYZ3 720 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 VPS28Q9UK41 221 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 HPCAL4Q9UM19 191 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 HS3ST2Q9Y278 367 aa16.97■□□□□ 0.31
LINC00963-208ENST00000454968 DNALI1O14645 258 aaPredicted RBP16.96■□□□□ 0.31
LINC00963-208ENST00000454968 ZBTB24O43167 697 aaPredicted RBP16.96■□□□□ 0.31
LINC00963-208ENST00000454968 SNAP91O60641 907 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 METTL18O95568 372 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 JCHAINP01591 159 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 ITIH2P19823 946 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 GEMIN4P57678 1058 aaKnown RBP16.96■□□□□ 0.31
LINC00963-208ENST00000454968 SEMA5AQ13591 1074 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 CUL1Q13616 776 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 LBRQ14739 615 aaKnown RBP16.96■□□□□ 0.31
LINC00963-208ENST00000454968 TRIP13Q15645 432 aaPredicted RBP16.96■□□□□ 0.31
LINC00963-208ENST00000454968 ELF2Q15723 593 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 AAK1Q2M2I8 961 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 PARP6Q2NL67 630 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 RNASEH2BQ5TBB1 312 aaKnown RBP16.96■□□□□ 0.31
LINC00963-208ENST00000454968 MARC1Q5VT66 337 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 ZDHHC24Q6UX98 284 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 METTL3Q86U44 580 aaKnown RBP16.96■□□□□ 0.31
LINC00963-208ENST00000454968 IFT20Q8IY31 132 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 SLC44A3Q8N4M1 653 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.96■□□□□ 0.31
LINC00963-208ENST00000454968 DNASE1L2Q92874 299 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 TADA1Q96BN2 335 aa16.96■□□□□ 0.31
LINC00963-208ENST00000454968 SNF8Q96H20 258 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms