RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PRKCGP05129 697 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 FYNP06241 537 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 PRKCHP24723 683 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 CRHR1P34998 444 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 PGFP49763 221 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 RBBP5Q15291 538 aaKnown RBP12.18□□□□□ -0.46
SMPD4-213ENST00000454468 SNX30Q5VWJ9 437 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 ZNF781Q8N8C0 355 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 FAXDC2Q96IV6 333 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 MIPEPQ99797 713 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 NAT9Q9BTE0 207 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 SLC39A8Q9C0K1 460 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 CATSPERBQ9H7T0 1116 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 KANSL3Q9P2N6 904 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 EME2A4GXA9 379 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-213ENST00000454468 PIGNO95427 931 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 UBTFL6P0CB48 400 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-213ENST00000454468 MPSTP25325 297 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 CASP2P42575 452 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 ETV4P43268 484 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 NUDT2P50583 147 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 IRX1P78414 480 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-213ENST00000454468 NSUN2Q08J23 767 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMPD4-213ENST00000454468 ITGA7Q13683 1181 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 SPDYAQ5MJ70 313 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 DEFB128Q7Z7B8 93 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 TTC9BQ8N6N2 239 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 GSTCDQ8NEC7 633 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 SOCS4Q8WXH5 440 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 DNAJC9Q8WXX5 260 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 HDAC11Q96DB2 347 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 WASF2Q9Y6W5 498 aa12.18□□□□□ -0.46
SMPD4-213ENST00000454468 WDR81Q562E7 1941 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 I6L893 689 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 NVLO15381 856 aaKnown RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 AP2A1O95782 977 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 GATMP50440 423 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ZNF235Q14590 738 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 INTS6LQ5JSJ4 861 aaKnown RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 SPANXN3Q5MJ09 141 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 C14orf80Q86SX3 495 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 MZB1Q8WU39 189 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 SPDL1Q96EA4 605 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 CPNE1Q99829 537 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 TBL1YQ9BQ87 522 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 IL1RL2Q9HB29 575 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 DNAJB4Q9UDY4 337 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 TAGLN3Q9UI15 199 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ANKRD12Q6UB98 2062 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ATP6AP2A0A1C7CYW4 349 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 OR51F1A6NGY5 319 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 MAP3K7O43318 606 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ATP6AP2O75787 350 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 RPL17P18621 184 aaKnown RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 COPAP53621 1224 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 TBX4P57082 545 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 TUSC3Q13454 348 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ART3Q13508 389 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 PTPRCAPQ14761 206 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 TRPV1Q8NER1 839 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 NAF1Q96HR8 494 aaKnown RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 KCNK4Q9NYG8 393 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ADA2Q9NZK5 511 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 GMIPQ9P107 970 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 COPG2Q9UBF2 871 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 HCSTQ9UBK5 93 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ACOT9Q9Y305 439 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ARID2Q68CP9 1835 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 HMX2A2RU54 273 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 NCF1BA6NI72 391 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 NCF1CA8MVU1 366 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 KIF3CO14782 793 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ZCCHC18P0CG32 403 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 NCF1P14598 390 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 STMN1P16949 149 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 PAPOLAP51003 745 aaKnown RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ABCE1P61221 599 aaKnown RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 GRTP1Q5TC63 336 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 KYAT3Q6YP21 454 aaKnown RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 CENPIQ92674 756 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 INPP5DQ92835 1189 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 ACE2Q9BYF1 805 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 SUDS3Q9H7L9 328 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-213ENST00000454468 GIT1Q9Y2X7 761 aa12.17□□□□□ -0.46
SMPD4-213ENST00000454468 CCDC160A6NGH7 325 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 TRIM13O60858 407 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 GM2AP17900 193 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 PKNOX1P55347 436 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 ACSBG2Q5FVE4 666 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 MORN1Q5T089 497 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 TMEM198Q66K66 360 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 ARNTL2Q8WYA1 636 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 RSPH1Q8WYR4 309 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 DHRS4Q9BTZ2 278 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 ILKAPQ9H0C8 392 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-213ENST00000454468 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 WDR6Q9NNW5 1121 aaKnown RBP12.16□□□□□ -0.46
SMPD4-213ENST00000454468 XPR1Q9UBH6 696 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 TSHRP16473 764 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms