RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ETV5P41161 510 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 NOP2P46087 812 aaKnown RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 GALCP54803 685 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 SMARCB1Q12824 385 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ZNF177Q13360 481 aaPredicted RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ART3Q13508 389 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 KCNB1Q14721 858 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 STARD3Q14849 445 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ZBTB6Q15916 424 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 NADK2Q4G0N4 442 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 BTBD8Q5XKL5 378 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 GRAMD4Q6IC98 578 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 GUSBP11Q6P575 273 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 HEATR3Q7Z4Q2 680 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 USP37Q86T82 979 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 KRTAP1-3Q8IUG1 177 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ITPRIPQ8IWB1 547 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 CCDC13Q8IYE1 715 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 SPPL2BQ8TCT7 592 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 OTUB2Q96DC9 234 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 C19orf60Q96EN9 201 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 CCDC120Q96HB5 630 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 SGSM3Q96HU1 749 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 SLC45A3Q96JT2 553 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 TEKT3Q9BXF9 490 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 LNPKQ9C0E8 428 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 B3GNT4Q9C0J1 378 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 CDH19Q9H159 772 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 SGK2Q9HBY8 427 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ST7Q9NRC1 585 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 DNAJC17Q9NVM6 304 aaKnown RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 NLGN3Q9NZ94 848 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 CFAP97Q9P2B7 532 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 TBC1D14Q9P2M4 693 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 UXTQ9UBK9 157 aaPredicted RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 ZNF451Q9Y4E5 1061 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 KLF2Q9Y5W3 355 aaPredicted RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 RYR1P21817 5038 aa5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 TDRD6O60522 2096 aaKnown RBP5.54□□□□□ -1.52
SBDSP1-204ENST00000453858 TTC41PQ6P2S7 1318 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 EPPK1P58107 5090 aaKnown RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 ZNF840PA6NDX5 716 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 SMCO2A6NFE2 343 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 ZNF891A8MT65 544 aaPredicted RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 SH2B2O14492 632 aaPredicted RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 NPC1O15118 1278 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 SCAMP1O15126 338 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 SHOXO15266 292 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 FFAR2O15552 330 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CBFA2T2O43439 604 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 ZG16O60844 167 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 HMMRO75330 724 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CNTN5O94779 1100 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 WNT11O96014 354 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CALM1P0DP23 149 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CALM2P0DP24 149 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CALM3P0DP25 149 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 ITIH1P19827 911 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CD82P27701 267 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 SSTR2P30874 369 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 YWHABP31946 246 aaKnown RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 LILRA4P59901 499 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 ZNF445P59923 1031 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 RPS14P62263 151 aaKnown RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 IFRD2Q12894 506 aaPredicted RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 FOXD4Q12950 439 aaPredicted RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 PRPF4BQ13523 1007 aaKnown RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CDKN3Q16667 212 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 DEFB109BQ30KR1 87 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 DCAF4L1Q3SXM0 396 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 MIIPQ5JXC2 388 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 NUGGCQ68CJ6 796 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 HIST2H2BDQ6DRA6 164 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 RNF111Q6ZNA4 994 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 DPH6Q7L8W6 267 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 EFL1Q7Z2Z2 1120 aaKnown RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 IQCHQ86VS3 1027 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CACUL1Q86Y37 369 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 C4orf19Q8IY42 314 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 ARHGEF39Q8N4T4 335 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 AGBL5Q8NDL9 886 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 OR2T3Q8NH03 318 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 SCFD1Q8WVM8 642 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 JPH3Q8WXH2 748 aaPredicted RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 USP7Q93009 1102 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 WBP2Q969T9 261 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 MRFAP1L1Q96HT8 127 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 BARD1Q99728 777 aaKnown RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 DSCC1Q9BVC3 393 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 HDAC8Q9BY41 377 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 RPF1Q9H9Y2 349 aaKnown RBP5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 AASDHPPTQ9NRN7 309 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 PCMTD2Q9NV79 361 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 SMPD4Q9NXE4 827 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 ARHGAP20Q9P2F6 1191 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CCDC39Q9UFE4 941 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 TUBGCP4Q9UGJ1 667 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 CPQQ9Y646 472 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 U3KQE9 123 aa5.53□□□□□ -1.52
SBDSP1-204ENST00000453858 UNC13CQ8NB66 2214 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms