RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 K7ERQ8 282 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 CBX4O00257 560 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 PLK4O00444 970 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 TM4SF5O14894 197 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 ATP9BO43861 1147 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 FSBPO95073 299 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 IL1BP01584 269 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 SRCP12931 536 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 GNSP15586 552 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 GLDCP23378 1020 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 HOXD12P35452 270 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 PBX1P40424 430 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 PRKCIP41743 596 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 ZNF143P52747 638 aaPredicted RBP9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 METAP1P53582 386 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 ATXN3P54252 364 aaPredicted RBP9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 OGDHQ02218 1023 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 POM121L1PQ3SYA9 428 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 C6orf118Q5T5N4 469 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 DAB2IPQ5VWQ8 1189 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 Q6ZVU0 165 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 RABEPKQ7Z6M1 372 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 SLFN11Q7Z7L1 901 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 PYROXD2Q8N2H3 581 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 HDDC3Q8N4P3 179 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 SH2D3CQ8N5H7 860 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 AADATQ8N5Z0 425 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 ATP11CQ8NB49 1132 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 DNASE2BQ8WZ79 361 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 OR8D1Q8WZ84 308 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 C2orf49Q9BVC5 232 aaPredicted RBP9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 OSBPL2Q9H1P3 480 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 SGK2Q9HBY8 427 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 CAPN10Q9HC96 672 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 NDFIP2Q9NV92 336 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 PPARGC1AQ9UBK2 798 aaKnown RBP9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 SUSD2Q9UGT4 822 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 DNAI1Q9UI46 699 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 VPS51Q9UID3 782 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 SCML1Q9UN30 329 aa9.69□□□□□ -0.86
CDC42EP3-203ENST00000453555 A0A1B0GTW7 788 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 ILVBLA1L0T0 632 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 DDX3XO00571 662 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 SMAD6O43541 496 aaKnown RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 RTN2O75298 545 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 LRIG2O94898 1065 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 FTLP02792 175 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 SYPP08247 313 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 PLEKP08567 350 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 C5AR1P21730 350 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 SLC19A1P41440 591 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 GALCP54803 685 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 FOXK2Q01167 660 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 GNA12Q03113 381 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 SFSWAPQ12872 951 aaKnown RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 MAMLD1Q13495 774 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 ELAVL3Q14576 367 aaKnown RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 TDRD12Q587J7 1177 aaKnown RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 FIGNQ5HY92 759 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 MANEALQ5VSG8 457 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 USP30Q70CQ3 517 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 TMC6Q7Z403 805 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 MINDY1Q8N5J2 469 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 DCAF4L2Q8NA75 395 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 NTAN1Q96AB6 310 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 BIRC7Q96CA5 298 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 TBC1D31Q96DN5 1066 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 VCPIP1Q96JH7 1222 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 CNPY3Q9BT09 278 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 EDEM3Q9BZQ6 932 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 TNKS2Q9H2K2 1166 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 ATP13A1Q9HD20 1204 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 PARVAQ9NVD7 372 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 MYO1AQ9UBC5 1043 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 ZNF212Q9UDV6 495 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 SARDHQ9UL12 918 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 FZD10Q9ULW2 581 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 ACTL7AQ9Y615 435 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 SLCO1B1Q9Y6L6 691 aa9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 ASCC3Q8N3C0 2202 aaKnown RBP9.68□□□□□ -0.86
CDC42EP3-203ENST00000453555 A0A1W2PQJ5 194 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 GIPC1O14908 333 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 MCF2LO15068 1137 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 BCAT2O15382 392 aaPredicted RBP9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 CREB3O43889 395 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 KCNK5O95279 499 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 GZMAP12544 262 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 RHOQP17081 205 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 GOT1P17174 413 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 DESP17661 470 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 PSMA2P25787 234 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 ACVRL1P37023 503 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 CSNK1EP49674 416 aaKnown RBP9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 DNA2P51530 1060 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 NRG1Q02297 640 aaPredicted RBP9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 GRIK2Q13002 908 aa9.67□□□□□ -0.86
CDC42EP3-203ENST00000453555 EFHC2Q5JST6 749 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms