RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SYT13Q7L8C5 426 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 PEX26Q7Z412 305 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 TFAP2DQ7Z6R9 452 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ADIPOR2Q86V24 386 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FAM72BQ86X60 149 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 RCOR2Q8IZ40 523 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 PYROXD2Q8N2H3 581 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 UBL4BQ8N7F7 174 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF513Q8N8E2 541 aaPredicted RBP8.92□□□□□ -0.98
COL28A1-205ENST00000453441 LRRC57Q8N9N7 239 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 EXD1Q8NHP7 514 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CASKIN2Q8WXE0 1202 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FAF2Q96CS3 445 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 P2RY11Q96G91 374 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 POM121Q96HA1 1249 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CSPG4P5Q96PW8 444 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 GABRG3Q99928 467 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FEM1AQ9BSK4 669 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CALN1Q9BXU9 219 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CIPCQ9C0C6 399 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 KCNH6Q9H252 994 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FBRSL1Q9HCM7 1045 aaKnown RBP8.92□□□□□ -0.98
COL28A1-205ENST00000453441 POLMQ9NP87 494 aaPredicted RBP8.92□□□□□ -0.98
COL28A1-205ENST00000453441 GPATCH2LQ9NWQ4 482 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 MPP6Q9NZW5 540 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CWC15Q9P013 229 aaKnown RBP8.92□□□□□ -0.98
COL28A1-205ENST00000453441 DLGAP2Q9P1A6 1054 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 THAP10Q9P2Z0 257 aaPredicted RBP8.92□□□□□ -0.98
COL28A1-205ENST00000453441 SALL4Q9UJQ4 1053 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 VPS28Q9UK41 221 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FBXO4Q9UKT5 387 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 AMFRQ9UKV5 643 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CLEC4EQ9ULY5 219 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 MMP17Q9ULZ9 603 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 EFR3BQ9Y2G0 817 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 OR51B4Q9Y5P0 310 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 SNX10Q9Y5X0 201 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 RAD54BQ9Y620 910 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF318Q5VUA4 2279 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 LRRD1A4D1F6 860 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 ARHGAP42A6NI28 874 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 PRRT4C9JH25 899 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 PALMO75781 387 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 ZRANB2O95218 330 aaKnown RBP eCLIP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 PDGFBP01127 241 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 KRT1P04264 644 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 TCF4P15884 667 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 GOT1P17174 413 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 ERCC2P18074 760 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 KDELR1P24390 212 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 AVPR2P30518 371 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 HOXA6P31267 233 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 GPC1P35052 558 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 GJC1P36383 396 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 CTSOP43234 321 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 CXCL12P48061 93 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 IRAK1P51617 712 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 DGKEP52429 567 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 RWDD2BP57060 319 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 TFDP2Q14188 446 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 DPYSL3Q14195 570 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 STARD3Q14849 445 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 PPP2R5EQ16537 467 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 FUT11Q495W5 492 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 FSCBQ5H9T9 825 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 DAB2IPQ5VWQ8 1189 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 TXNRD3NBQ6F5E7 133 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 NT5DC3Q86UY8 548 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 CIR1Q86X95 450 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 CHPFQ8IZ52 775 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 CAMKK1Q8N5S9 505 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 TMEM105Q8N8V8 129 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 DTWD2Q8NBA8 298 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 RPLP0P6Q8NHW5 317 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 WFDC5Q8TCV5 224 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 EZH1Q92800 747 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 ARHGEF2Q92974 986 aaKnown RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 ALG14Q96F25 216 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 MAK16Q9BXY0 300 aaKnown RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 ACE2Q9BYF1 805 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 FAM126AQ9BYI3 521 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 IRF2BPLQ9H1B7 796 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 ATP13A1Q9HD20 1204 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 C11orf16Q9NQ32 467 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 HAUS2Q9NVX0 235 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 SUN2Q9UH99 717 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 GUCA1BQ9UMX6 200 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 TFR2Q9UP52 801 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 HS3ST2Q9Y278 367 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 MTF2Q9Y483 593 aaPredicted RBP8.91□□□□□ -0.98
COL28A1-205ENST00000453441 PCDHA3Q9Y5H8 950 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 DUSP10Q9Y6W6 482 aa8.91□□□□□ -0.98
COL28A1-205ENST00000453441 KMT2EQ8IZD2 1858 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 CCDC163A0A0D9SF12 145 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 TARSL2A2RTX5 802 aaKnown RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 FIGNL2A6NMB9 653 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 H3BM21 787 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 DCLK1O15075 740 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms