RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 CDKL1Q00532 357 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 MYLK3Q32MK0 819 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 FAM72AQ5TYM5 149 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 SYPL2Q5VXT5 272 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 FAM72DQ6L9T8 149 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 ZYG11AQ6WRX3 759 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 SETD3Q86TU7 594 aaPredicted RBP16■□□□□ 0.15
TRA2B-205ENST00000453386 FAM72BQ86X60 149 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 KCTD4Q8WVF5 259 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 LENG1Q96BZ8 264 aaPredicted RBP16■□□□□ 0.15
TRA2B-205ENST00000453386 SETD4Q9NVD3 440 aa16■□□□□ 0.15
TRA2B-205ENST00000453386 NDUFV1P49821 464 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 PAFAH1B3Q15102 231 aaKnown RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 ANO4Q32M45 955 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 PABPC1LQ4VXU2 614 aaKnown RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 C9orf57Q5W0N0 161 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 SPATA6LQ8N4H0 392 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 EIF2AQ9BY44 585 aaKnown RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 PIGVQ9NUD9 493 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 STRNO43815 780 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 APOA4P06727 396 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 NMBRP28336 390 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 CSE1LP55060 971 aaKnown RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 DPYSQ14117 519 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 AHI1Q8N157 1196 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 LRRC52Q8N7C0 313 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 KLHL32Q96NJ5 620 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 MRPL1Q9BYD6 325 aaKnown RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 CASS4Q9NQ75 786 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 FIS1Q9Y3D6 152 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 CLDN5O00501 218 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 HNRNPRO43390 633 aaKnown RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 CABYRO75952 493 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 DDHD2O94830 711 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 AKAP5P24588 427 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 TKTP29401 623 aaKnown RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 INHBCP55103 352 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 CYTH1Q15438 398 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 NRF1Q16656 503 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 FBXO47Q5MNV8 452 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 OTUD1Q5VV17 481 aaPredicted RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 PDZD4Q76G19 769 aaPredicted RBP15.99■□□□□ 0.15
TRA2B-205ENST00000453386 CRYBG2Q8N1P7 616 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 EME1Q96AY2 570 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 PLEKHA5Q9HAU0 1116 aa15.99■□□□□ 0.15
TRA2B-205ENST00000453386 TMEM233B4DJY2 109 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 CNMDO75829 334 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 BCAS2O75934 225 aaPredicted RBP15.98■□□□□ 0.15
TRA2B-205ENST00000453386 SLC25A27O95847 323 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 NOS2P35228 1153 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 USP46P62068 366 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 PTK2BQ14289 1009 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 OLFML2BQ68BL8 750 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 PTAR1Q7Z6K3 402 aaPredicted RBP15.98■□□□□ 0.15
TRA2B-205ENST00000453386 SULF1Q8IWU6 871 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 FSTL5Q8N475 847 aaPredicted RBP15.98■□□□□ 0.15
TRA2B-205ENST00000453386 CPSF7Q8N684 471 aaKnown RBP15.98■□□□□ 0.15
TRA2B-205ENST00000453386 LINC01465Q8N7H1 131 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 SLC7A14Q8TBB6 771 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 OTUD5Q96G74 571 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 OMDQ99983 421 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 MLPHQ9BV36 600 aaPredicted RBP15.98■□□□□ 0.15
TRA2B-205ENST00000453386 SEMA6AQ9H2E6 1030 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 PRDM16Q9HAZ2 1276 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 ZBTB26Q9HCK0 441 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 VPS28Q9UK41 221 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 STAP1Q9ULZ2 295 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 TMCO1Q9UM00 188 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 PHF24Q9UPV7 400 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 CSADQ9Y600 493 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 hCG_2014768A0A024R1R8 64 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 IRF6O14896 467 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 DCLK1O15075 740 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 TMCC1O94876 653 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 SBK3P0C264 359 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 NFKB1P19838 968 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 ZNF460Q14592 562 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 EML3Q32P44 896 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 AMIGO2Q86SJ2 522 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 TMEM126BQ8IUX1 230 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 TMEM151AQ8N4L1 468 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 PCDH20Q8N6Y1 951 aaKnown RBP15.98■□□□□ 0.15
TRA2B-205ENST00000453386 SNX27Q96L92 541 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 ZNF696Q9H7X3 374 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 LRRC4Q9HBW1 653 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 KLK14Q9P0G3 267 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 VTI1BQ9UEU0 232 aa15.98■□□□□ 0.15
TRA2B-205ENST00000453386 COPG1Q9Y678 874 aaKnown RBP15.98■□□□□ 0.15
TRA2B-205ENST00000453386 SPTLC1O15269 473 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 RNASEH2AO75792 299 aaKnown RBP15.97■□□□□ 0.15
TRA2B-205ENST00000453386 VAPBO95292 243 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 CYP2B6P20813 491 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 CD68P34810 354 aaPredicted RBP15.97■□□□□ 0.15
TRA2B-205ENST00000453386 TPI1P60174 286 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 DCAF4L1Q3SXM0 396 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 TMEM259Q4ZIN3 620 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 CATSPER4Q7RTX7 472 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 TICAM1Q8IUC6 712 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 SLC41A1Q8IVJ1 513 aa15.97■□□□□ 0.15
TRA2B-205ENST00000453386 SIX6OS1Q8N1H7 587 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms