RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 EHD1Q9H4M9 534 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 FANCEQ9HB96 536 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZBTB26Q9HCK0 441 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 GCM1Q9NP62 436 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SOHLH2Q9NX45 425 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ALKBH4Q9NXW9 302 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PSD3Q9NYI0 1048 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CYP39A1Q9NYL5 469 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CNIH4Q9P003 139 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SH3BP4Q9P0V3 963 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 KLHL14Q9P2G3 628 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 LRIT1Q9P2V4 623 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 AMACRQ9UHK6 382 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MBD1Q9UIS9 605 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 OSGIN1Q9UJX0 560 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ANAPC2Q9UJX6 822 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RCOR1Q9UKL0 485 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC8A2Q9UPR5 921 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ASB1Q9Y576 335 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MROH5Q6ZUA9 1318 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 RPTORQ8N122 1335 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZNF335Q9H4Z2 1342 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 A0A1W2PQJ5 194 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 DENND3A2RUS2 1198 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 GAGE10A6NGK3 116 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ENO4A6NNW6 628 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 KCNJ18B7U540 433 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 KIF28PB7ZC32 967 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 H0YIV9 168 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC33A1O00400 549 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 EBAG9O00559 213 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 RASGRF2O14827 1237 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 IFIT3O14879 490 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZNF185O15231 689 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 POLR2DO15514 142 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SRGAP3O43295 1099 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCNT2O60583 730 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 OPHN1O60890 802 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ERLIN1O75477 346 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 TADA2AO75478 443 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 UNC5CO95185 931 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 LETM1O95202 739 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 KCNK5O95279 499 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 OR2C1O95371 312 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 DIRAS3O95661 229 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 FGFR1OPO95684 399 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 GNAI3P08754 354 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 DBHP09172 617 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SRCP12931 536 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ETS1P14921 441 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 PRLRP16471 622 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 TACR1P25103 407 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 USP8P40818 1118 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC11A2P49281 568 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 PMS2P54278 862 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 GNAI1P63096 354 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 MXRA7P84157 204 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SF3A3Q12874 501 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 IKQ13123 557 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 BOP1Q14137 746 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 FRG1Q14331 258 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 KCNJ12Q14500 433 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 HS1BP3Q53T59 392 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 TDRD12Q587J7 1177 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SPDYAQ5MJ70 313 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 STXBP5Q5T5C0 1151 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 CYP4A22Q5TCH4 519 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 GKAP1Q5VSY0 366 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 BICRALQ6AI39 1079 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 MAMDC4Q6UXC1 1216 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 RBM43Q6ZSC3 357 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ARMCX2Q7L311 632 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ARMC9Q7Z3E5 817 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 KBTBD6Q86V97 674 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 CEP57Q86XR8 500 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 MB21D1Q8N884 522 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 FAM184AQ8NB25 1140 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 RAPGEF4Q8WZA2 1011 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 HOXB13Q92826 284 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZKSCAN4Q969J2 545 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 INTS12Q96CB8 462 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 TMCO6Q96DC7 493 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 NRBF2Q96F24 287 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 NAF1Q96HR8 494 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 HIST1H2AHQ96KK5 128 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 ADAD1Q96M93 576 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 HIST1H2AJQ99878 128 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC25A23Q9BV35 468 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 CARD6Q9BX69 1037 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SGPP1Q9BX95 441 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 CACNG6Q9BXT2 260 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 MRPL1Q9BYD6 325 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SCPEP1Q9HB40 452 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 RPRD1BQ9NQG5 326 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 IARS2Q9NSE4 1012 aaKnown RBP4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 CENPMQ9NSP4 180 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 TMLHEQ9NVH6 421 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 SIRT5Q9NXA8 310 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 FTSJ1Q9UET6 329 aa4.57□□□□□ -1.68
HMGB3P21-201ENST00000452483 TEKT2Q9UIF3 430 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms