RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 SLFN11Q7Z7L1 901 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 NLRP14Q86W24 1093 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 PYROXD2Q8N2H3 581 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 PIP4K2CQ8TBX8 421 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 CCDC114Q96M63 670 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 ORAI3Q9BRQ5 295 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 CNPY3Q9BT09 278 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 TNKS2Q9H2K2 1166 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 SLC32A1Q9H598 525 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 IL21RQ9HBE5 538 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 DNAI1Q9UI46 699 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 PPM1HQ9ULR3 514 aa18.35■□□□□ 0.53
CTNS-204ENST00000452111 ALOX15BO15296 676 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 RTN2O75298 545 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 ACVRL1P37023 503 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 PRKCIP41743 596 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 MAPKAPK2P49137 400 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 ARF5P84085 180 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 OGDHQ02218 1023 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 SCAPQ12770 1279 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 MAMLD1Q13495 774 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 TEAD4Q15561 434 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 EFHC2Q5JST6 749 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 RETSATQ6NUM9 610 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 TMC6Q7Z403 805 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 ADAT2Q7Z6V5 191 aaKnown RBP18.34■□□□□ 0.53
CTNS-204ENST00000452111 PIP4P1Q86T03 277 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 OR2A12Q8NGT7 310 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 VCPIP1Q96JH7 1222 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 SLC6A18Q96N87 628 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 EDEM3Q9BZQ6 932 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 GAREM1Q9H706 876 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 PARVAQ9NVD7 372 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 TMEM248Q9NWD8 314 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 FARP1Q9Y4F1 1045 aaPredicted RBP18.34■□□□□ 0.53
CTNS-204ENST00000452111 ACTL7AQ9Y615 435 aa18.34■□□□□ 0.53
CTNS-204ENST00000452111 ASCC3Q8N3C0 2202 aaKnown RBP18.34■□□□□ 0.53
CTNS-204ENST00000452111 ADAMTS9Q9P2N4 1935 aa18.33■□□□□ 0.53
CTNS-204ENST00000452111 TBC1D3DA0A087WVF3 549 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3IA0A087WXS9 549 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3EA0A087X179 549 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3KA0A087X1G2 549 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 A0A1W2PPC4 97 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3FA6NER0 549 aaPredicted RBP18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3LB9A6J9 549 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 DDX3XO00571 662 aaKnown RBP eCLIP18.33■□□□□ 0.52
CTNS-204ENST00000452111 GJB3O75712 270 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 ZMPSTE24O75844 475 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 CER1O95813 267 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 FTLP02792 175 aaPredicted RBP18.33■□□□□ 0.52
CTNS-204ENST00000452111 CTSLP07711 333 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3HP0C7X1 549 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 CD59P13987 128 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 DESP17661 470 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 PSMA2P25787 234 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 CHRNA3P32297 505 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 GRIA4P48058 902 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 SERPINH1P50454 418 aaKnown RBP18.33■□□□□ 0.52
CTNS-204ENST00000452111 PPP2CBP62714 309 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 PPP2CAP67775 309 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 CNTN1Q12860 1018 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 KIF19Q2TAC6 998 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 HLA-BQ31612 363 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 FIGNQ5HY92 759 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3GQ6DHY5 549 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3CQ6IPX1 549 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 IL27RAQ6UWB1 636 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 TBC1D3Q8IZP1 549 aaPredicted RBP18.33■□□□□ 0.52
CTNS-204ENST00000452111 CHST14Q8NCH0 376 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 GRIN3AQ8TCU5 1115 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 EBF2Q9HAK2 575 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 OSGEPQ9NPF4 335 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 FZD10Q9ULW2 581 aa18.33■□□□□ 0.52
CTNS-204ENST00000452111 FNDC3AQ9Y2H6 1198 aaKnown RBP18.33■□□□□ 0.52
CTNS-204ENST00000452111 FCF1Q9Y324 198 aaKnown RBP18.33■□□□□ 0.52
CTNS-204ENST00000452111 CACNA1EQ15878 2313 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 UPK3BL1B0FP48 263 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 UPK3BL2E5RIL1 263 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 KPNA3O00505 521 aaPredicted RBP18.32■□□□□ 0.52
CTNS-204ENST00000452111 SLC7A4O43246 635 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 CREB3O43889 395 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 RAMP2O60895 175 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 EPHB2P29323 1055 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 PMLP29590 882 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 L1CAMP32004 1257 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 ETFBP38117 255 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 PBX1P40424 430 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 RECQLP46063 649 aaPredicted RBP18.32■□□□□ 0.52
CTNS-204ENST00000452111 DNA2P51530 1060 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 RACK1P63244 317 aaKnown RBP18.32■□□□□ 0.52
CTNS-204ENST00000452111 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
CTNS-204ENST00000452111 AGBL4Q5VU57 503 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 PLEKHA7Q6IQ23 1121 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 FAM131CQ96AQ9 280 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 ZNF653Q96CK0 615 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 ACE2Q9BYF1 805 aaPredicted RBP18.32■□□□□ 0.52
CTNS-204ENST00000452111 CNOT8Q9UFF9 292 aaKnown RBP18.32■□□□□ 0.52
CTNS-204ENST00000452111 ANKRD6Q9Y2G4 727 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 SNX11Q9Y5W9 270 aa18.32■□□□□ 0.52
CTNS-204ENST00000452111 SPAARA0A1B0GVQ0 90 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms