RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 C12orf4Q9NQ89 552 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 KMT5AQ9NQR1 393 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 C8orf4Q9NR00 106 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 DIABLOQ9NR28 239 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 ASNSD1Q9NWL6 643 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 GGA3Q9NZ52 723 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 CLIC5Q9NZA1 410 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 KIF17Q9P2E2 1029 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 ANKMY1Q9P2S6 941 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 DNMT3BQ9UBC3 853 aaKnown RBP3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 UBA2Q9UBT2 640 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 FBLN5Q9UBX5 448 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 EBF1Q9UH73 591 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 ANGPTL2Q9UKU9 493 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 NUP50Q9UKX7 468 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 GRID1Q9ULK0 1009 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 NFU1Q9UMS0 254 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 ANGEL1Q9UNK9 670 aaKnown RBP3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 ERGIC3Q9Y282 383 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 DTX4Q9Y2E6 619 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 AP3M1Q9Y2T2 418 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 RRP7AQ9Y3A4 280 aaKnown RBP3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 RABGAP1Q9Y3P9 1069 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 CACNG2Q9Y698 323 aa3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 TDRD9Q8NDG6 1382 aaKnown RBP3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 NUP153P49790 1475 aaKnown RBP3.72□□□□□ -1.81
HMGB3P8-201ENST00000449709 ZNF142P52746 1687 aaPredicted RBP3.71□□□□□ -1.81
HMGB3P8-201ENST00000449709 DCCP43146 1447 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 TANC1Q9C0D5 1861 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 TMEM265A0A087WTH1 108 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ABHD14A-ACY1A0A1B0GW23 586 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ILVBLA1L0T0 632 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZSCAN5BA6NJL1 495 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 CAPN14A8MX76 684 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 RSPH10B2B2RC85 870 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 FAM227AF5H4B4 570 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 CAPN9O14815 690 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF185O15231 689 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 NCAM2O15394 837 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 CYP26A1O43174 497 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 TEX33O43247 280 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 HOXC11O43248 304 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZW10O43264 779 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 B3GALT2O43825 422 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 EXTL3O43909 919 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 MAFKO60675 156 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 MAGEC1O60732 1142 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCDC22O60826 627 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 PHF2O75151 1096 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ATP2C2O75185 946 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ENTPD5O75356 428 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 DAB1O75553 588 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 UBXN7O94888 489 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 SNAPINO95295 136 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ITGB1P05556 798 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 LPLP06858 475 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 RPS17P08708 135 aaKnown RBP3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 SNRPAP09012 282 aaKnown RBP3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ALOX5P09917 674 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 RSPH10BP0C881 870 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 NCAM1P13591 858 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ICAM2P13598 275 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 MYL6BP14649 208 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 PFKFB1P16118 471 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF23P17027 643 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 MUTP22033 750 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 EDNRBP24530 442 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 PON1P27169 355 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 GSTM2P28161 218 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 HPDP32754 393 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 RCVRNP35243 200 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 KIR2DL1P43626 348 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 KIR2DL2P43627 348 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 HSPA13P48723 471 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ENTPD1P49961 510 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC26A2P50443 739 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ETV1P50549 477 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 PLCD1P51178 756 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 STAT2P52630 851 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 BLVRAP53004 296 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC5A3P53794 718 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC18A1P54219 525 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 NR1H2P55055 460 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 BPIFB3P59826 476 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 CYP4F2P78329 520 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 CD83Q01151 205 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ALDH6A1Q02252 535 aaKnown RBP3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 UBXN1Q04323 297 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 PRKCQQ04759 706 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 POU5F1BQ06416 359 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 RAD51Q06609 339 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 COASYQ13057 564 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 MRPL28Q13084 256 aaKnown RBP3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 TUSC3Q13454 348 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 SNAPC2Q13487 334 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 ALX1Q15699 326 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 PGS1Q32NB8 556 aa3.71□□□□□ -1.82
HMGB3P8-201ENST00000449709 EDRF1Q3B7T1 1238 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms