RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 FZD8Q9H461 694 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 MARCH7Q9H992 704 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 KLHL11Q9NVR0 708 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 CPQQ9Y646 472 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 CYP2C8P10632 490 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 MCF2P10911 925 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 SLC26A2P50443 739 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 TXNL4AP83876 142 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 KCTD2Q14681 263 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 LSM12Q3MHD2 195 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 RNF19BQ6ZMZ0 732 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 IGFN1Q86VF2 1251 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 GRAMD2AQ8IUY3 354 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 CDKL3Q8IVW4 592 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 CPSF3Q9UKF6 684 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 SLC8A2Q9UPR5 921 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 TRIM49D1C9J1S8 452 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 TOM1L1O75674 476 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 ACAT1P24752 427 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 IFITM2Q01629 132 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 SELENBP1Q13228 472 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 CCDC142Q17RM4 750 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 APOL6Q9BWW8 343 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 PNPLA8Q9NP80 782 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZC3H7BQ9UGR2 993 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZMPSTE24O75844 475 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 ETS1P14921 441 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 RPL22P35268 128 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 TRAF2Q12933 501 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 MXD4Q14582 209 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF618Q5T7W0 954 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZFP1Q6P2D0 407 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 GALNT18Q6P9A2 607 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 NAT8LQ8N9F0 302 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 CPT1BQ92523 772 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 TANKQ92844 425 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 MED30Q96HR3 178 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 CALN1Q9BXU9 219 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 THAP1Q9NVV9 213 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 MKS1Q9NXB0 559 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 PCDHGC3Q9UN70 934 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 SLC30A1Q9Y6M5 507 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 A0A087WXM4 84 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 CFHP08603 1231 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 IQCF3P0C7M6 154 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 GABRB3P28472 473 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 ADSLP30566 484 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 FLOT2Q14254 428 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 KIAA2013Q8IYS2 634 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 EMID1Q96A84 441 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 SPATA33Q96N06 139 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 TSNARE1Q96NA8 513 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 MROQ9BYG7 248 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 NFKBIZQ9BYH8 718 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 AASDHPPTQ9NRN7 309 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 RIC8BQ9NVN3 520 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 PRPSAP2O60256 369 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 NAB1Q13506 487 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 SEZ6Q53EL9 994 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 ACMSDQ8TDX5 336 aa13.69□□□□□ -0.22
SYNGAP1-204ENST00000449372 C7orf72A4D263 438 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 C22orf31O95567 290 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF182P17025 639 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 GRK2P25098 689 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 EPHA3P29320 983 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 PPM1LQ5SGD2 360 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 PERM1Q5SV97 790 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 CES4AQ5XG92 561 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 LRRC71Q8N4P6 559 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 LSM14AQ8ND56 463 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 SPATA18Q8TC71 538 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 CFAP36Q96G28 342 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 MRPL4Q9BYD3 311 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 PCDH12Q9NPG4 1184 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 KDELR1P24390 212 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 RPL10P27635 214 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 ELK3P41970 407 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 DPYSL3Q14195 570 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 PDK2Q15119 407 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF699Q32M78 642 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 TMTC4Q5T4D3 741 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 CCDC81Q6ZN84 652 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 CDHR3Q6ZTQ4 885 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF420Q8TAQ5 688 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 GTF3C2Q8WUA4 911 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 TFB1MQ8WVM0 346 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 ALPK1Q96QP1 1244 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 C20orf27Q9GZN8 174 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 TBC1D14Q9P2M4 693 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 ANKMY1Q9P2S6 941 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 CRNNQ9UBG3 495 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 MORF4L1Q9UBU8 362 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 SEPT3Q9UH03 358 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 ARHGAP26Q9UNA1 814 aa13.68□□□□□ -0.22
SYNGAP1-204ENST00000449372 NOP56O00567 594 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms