RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 IL31Q6EBC2 164 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 PRUNE1Q86TP1 453 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 BBOF1Q8ND07 529 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 CCDC110Q8TBZ0 833 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 CASKIN2Q8WXE0 1202 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 LRRC45Q96CN5 670 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 KXD1Q9BQD3 176 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 C2orf49Q9BVC5 232 aaPredicted RBP19.66■□□□□ 0.74
RPS28-202ENST00000449223 HPCAL4Q9UM19 191 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 SLC27A6Q9Y2P4 619 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 ESYT3A0FGR9 886 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 DNALI1O14645 258 aaPredicted RBP19.66■□□□□ 0.74
RPS28-202ENST00000449223 ARSAP15289 507 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 ADCY8P40145 1251 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 MAGEA6P43360 314 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 VSNL1P62760 191 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 GPS1Q13098 491 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 PLEKHG6Q3KR16 790 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 TMCO4Q5TGY1 634 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 KLHDC8BQ8IXV7 354 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 PLCD3Q8N3E9 789 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 NXPE3Q969Y0 559 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 ZFYVE19Q96K21 471 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 TRMT61BQ9BVS5 477 aaKnown RBP19.66■□□□□ 0.74
RPS28-202ENST00000449223 EBF3Q9H4W6 596 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 VPS28Q9UK41 221 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 FARP1Q9Y4F1 1045 aaPredicted RBP19.66■□□□□ 0.74
RPS28-202ENST00000449223 NUMBLQ9Y6R0 609 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 OTOL1A6NHN0 477 aaPredicted RBP19.65■□□□□ 0.74
RPS28-202ENST00000449223 SMAPO00193 183 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 ECHS1P30084 290 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 CD70P32970 193 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 RUNX3Q13761 415 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 TRADDQ15628 312 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 KCTD19Q17RG1 926 aaPredicted RBP19.65■□□□□ 0.74
RPS28-202ENST00000449223 PUS10Q3MIT2 529 aaKnown RBP19.65■□□□□ 0.74
RPS28-202ENST00000449223 INO80DQ53TQ3 878 aaPredicted RBP19.65■□□□□ 0.74
RPS28-202ENST00000449223 MARC1Q5VT66 337 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 PCGF5Q86SE9 256 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 YAF2Q8IY57 180 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 CPA6Q8N4T0 437 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 CNTD1Q8N815 330 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 NSMCE1Q8WV22 266 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 ART4Q93070 314 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 XPO6Q96QU8 1125 aaKnown RBP19.65■□□□□ 0.74
RPS28-202ENST00000449223 TRIM31Q9BZY9 425 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 DPH5Q9H2P9 285 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 ZDHHC18Q9NUE0 388 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 SEPT10Q9P0V9 454 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 INTS6Q9UL03 887 aaKnown RBP19.65■□□□□ 0.74
RPS28-202ENST00000449223 ATP8A1Q9Y2Q0 1164 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 SNX24Q9Y343 169 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 UNC80Q8N2C7 3258 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 COL4A2P08572 1712 aa19.65■□□□□ 0.74
RPS28-202ENST00000449223 C2CD4DB7Z1M9 353 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 JCHAINP01591 159 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 CD68P34810 354 aaPredicted RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 FDFT1P37268 417 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 CARSP49589 748 aaKnown RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 ARF5P84085 180 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 CAV1Q03135 178 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 NR1H3Q13133 447 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 SEMA5AQ13591 1074 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 PARP6Q2NL67 630 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 RNASEH2BQ5TBB1 312 aaKnown RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 ALG1LQ6GMV1 187 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 ITPRIPL1Q6GPH6 555 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 ASTLQ6HA08 431 aaPredicted RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 HIBCHQ6NVY1 386 aaPredicted RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 CCNI2Q6ZMN8 369 aaPredicted RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 ARHGEF18Q6ZSZ5 1173 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 HOOK3Q86VS8 718 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 SPON2Q9BUD6 331 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 RPP25Q9BUL9 199 aaKnown RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 GBA3Q9H227 469 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 ABCB8Q9NUT2 735 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 KLHL8Q9P2G9 620 aaPredicted RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 VPS51Q9UID3 782 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 GGA2Q9UJY4 613 aa19.64■□□□□ 0.73
RPS28-202ENST00000449223 TPX2Q9ULW0 747 aaKnown RBP19.64■□□□□ 0.73
RPS28-202ENST00000449223 ZBTB24O43167 697 aaPredicted RBP19.63■□□□□ 0.73
RPS28-202ENST00000449223 CD160O95971 181 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 CISD3P0C7P0 127 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 PABPC1P11940 636 aaKnown RBP19.63■□□□□ 0.73
RPS28-202ENST00000449223 EIF2DP41214 584 aaKnown RBP19.63■□□□□ 0.73
RPS28-202ENST00000449223 VPS41P49754 854 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 GEMIN4P57678 1058 aaKnown RBP19.63■□□□□ 0.73
RPS28-202ENST00000449223 SLC20A2Q08357 652 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 SLC10A7Q0GE19 358 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 CALCOCO2Q13137 446 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 GRM2Q14416 872 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 LBRQ14739 615 aaKnown RBP19.63■□□□□ 0.73
RPS28-202ENST00000449223 MORF4L2Q15014 288 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 PITRM1Q5JRX3 1037 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 ZDHHC24Q6UX98 284 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 PID1Q7Z2X4 250 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 METTL3Q86U44 580 aaKnown RBP19.63■□□□□ 0.73
RPS28-202ENST00000449223 ZNF354CQ86Y25 554 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 APCDD1Q8J025 514 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 AHI1Q8N157 1196 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms