RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TIMM44O43615 452 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 SEC14L2O76054 403 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 GDF10P55107 478 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 SOX10P56693 466 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 PSMC5P62195 406 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 TRIM25Q14258 630 aaKnown RBP19.5■□□□□ 0.71
HMGA1-205ENST00000447654 SUZ12Q15022 739 aaKnown RBP19.5■□□□□ 0.71
HMGA1-205ENST00000447654 C6orf10Q5SRN2 563 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 ABRAXAS1Q6UWZ7 409 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 C4orf22Q6V702 233 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 KCTD8Q6ZWB6 473 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 VSIG10LQ86VR7 867 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 ABHD11Q8NFV4 315 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 ACTL9Q8TC94 416 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 LRTOMTQ8WZ04 291 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 ATP6V1E2Q96A05 226 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 SP140LQ9H930 580 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 MAP3K20Q9NYL2 800 aaKnown RBP19.5■□□□□ 0.71
HMGA1-205ENST00000447654 COPG2Q9UBF2 871 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 ADAMTS5Q9UNA0 930 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 TMA7Q9Y2S6 64 aaKnown RBP19.5■□□□□ 0.71
HMGA1-205ENST00000447654 TLL2Q9Y6L7 1015 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 TCRBV3S1A0A5B6 114 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 ALX3O95076 343 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 LYPLA2O95372 231 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 NR3C2P08235 984 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 DSG3P32926 999 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 LEPRP48357 1165 aaKnown RBP19.5■□□□□ 0.71
HMGA1-205ENST00000447654 MAPRE1Q15691 268 aaKnown RBP19.5■□□□□ 0.71
HMGA1-205ENST00000447654 ATP13A4Q4VNC1 1196 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 DCAF15Q66K64 600 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 KIAA1841Q6NSI8 718 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 CAPSLQ8WWF8 208 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 ATL1Q8WXF7 558 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 MAGED4Q96JG8 741 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 TCF12Q99081 682 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 KIFC3Q9BVG8 833 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 COG4Q9H9E3 785 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 DNMT3BQ9UBC3 853 aaKnown RBP19.5■□□□□ 0.71
HMGA1-205ENST00000447654 CROCCQ5TZA2 2017 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 FAM159BA6NKW6 160 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 KRT3P12035 628 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 HLCSP50747 726 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 RPL10AP62906 217 aaKnown RBP19.49■□□□□ 0.71
HMGA1-205ENST00000447654 BASP1P80723 227 aaKnown RBP19.49■□□□□ 0.71
HMGA1-205ENST00000447654 CNTN2Q02246 1040 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 ART3Q13508 389 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 PCLAFQ15004 111 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 ATAD3BQ5T9A4 648 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 CYS1Q717R9 158 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 USP37Q86T82 979 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 ANKRD13AQ8IZ07 590 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 PBXIP1Q96AQ6 731 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 OR2B2Q9GZK3 357 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 TP63Q9H3D4 680 aaPredicted RBP19.49■□□□□ 0.71
HMGA1-205ENST00000447654 TCF7L2Q9NQB0 619 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 KLHL11Q9NVR0 708 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 ZC3H7BQ9UGR2 993 aaKnown RBP19.49■□□□□ 0.71
HMGA1-205ENST00000447654 PCDHGC3Q9UN70 934 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 WDR81Q562E7 1941 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 TMEM191CA6NGB0 347 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 CXorf49A8MYA2 514 aaPredicted RBP19.49■□□□□ 0.71
HMGA1-205ENST00000447654 PSMD11O00231 422 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 ABCB1P08183 1280 aaPredicted RBP19.49■□□□□ 0.71
HMGA1-205ENST00000447654 TMEM191BP0C7N4 346 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 M6PRP20645 277 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 EEF1DP29692 281 aaKnown RBP19.49■□□□□ 0.71
HMGA1-205ENST00000447654 OPRL1P41146 370 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 STX1BP61266 288 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 TAP1Q03518 808 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 NME3Q13232 169 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 SLC36A3Q495N2 470 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 MTX3Q5HYI7 312 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 C4orf19Q8IY42 314 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 PARP8Q8N3A8 854 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 GOLM1Q8NBJ4 401 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 C17orf80Q9BSJ5 609 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 ADI1Q9BV57 179 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 EMCNQ9ULC0 261 aa19.49■□□□□ 0.71
HMGA1-205ENST00000447654 TANC1Q9C0D5 1861 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 C9IYK1 514 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 SLC16A4O15374 487 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 DEAF1O75398 565 aaPredicted RBP19.48■□□□□ 0.71
HMGA1-205ENST00000447654 CRYZL1O95825 349 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 CSE1LP55060 971 aaKnown RBP19.48■□□□□ 0.71
HMGA1-205ENST00000447654 PKNOX1P55347 436 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 NOMO3P69849 1222 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 PRAMEP78395 509 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 MERTKQ12866 999 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 PIGHQ14442 188 aaPredicted RBP19.48■□□□□ 0.71
HMGA1-205ENST00000447654 TAZQ16635 292 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 LACC1Q8IV20 430 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 EXOC8Q8IYI6 725 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 THNSL1Q8IYQ7 743 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 NIPA2Q8N8Q9 360 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 SLC7A3Q8WY07 619 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 CFAP36Q96G28 342 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 C11orf70Q9BRQ4 267 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 NAA50Q9GZZ1 169 aaKnown RBP19.48■□□□□ 0.71
HMGA1-205ENST00000447654 SEMA6AQ9H2E6 1030 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms