RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ZBP1Q9H171 429 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 STN1Q9H668 368 aaKnown RBP13.34□□□□□ -0.27
DDX56-206ENST00000446987 C10orf88Q9H8K7 445 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 RBAKQ9NYW8 714 aaPredicted RBP13.34□□□□□ -0.27
DDX56-206ENST00000446987 NOX1Q9Y5S8 564 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 BRWD1Q9NSI6 2320 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 PLXNA3P51805 1871 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 TCRBV7S2A1N4TA0A589 114 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 TRIM64BA6NI03 449 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 TRIM64CA6NLI5 447 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 AQP9O43315 295 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 CSPG5O95196 566 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 NR3C1P04150 777 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 ATP6V1B1P15313 513 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 FOSL2P15408 326 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 TTKP33981 857 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 MARCKSL1P49006 195 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 UBE3AQ05086 875 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 OVGP1Q12889 678 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 SNRNP35Q16560 246 aaKnown RBP13.33□□□□□ -0.27
DDX56-206ENST00000446987 MOGQ16653 247 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 GRAMD1BQ3KR37 738 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 RFX8Q6ZV50 586 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 TAS1R1Q7RTX1 841 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 ADGRD2Q7Z7M1 963 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 TTC7BQ86TV6 843 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 XXYLT1Q8NBI6 393 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 TSPAN14Q8NG11 270 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 ZNF420Q8TAQ5 688 aaPredicted RBP13.33□□□□□ -0.27
DDX56-206ENST00000446987 SLC26A7Q8TE54 656 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 C9orf72Q96LT7 481 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 FAM193BQ96PV7 902 aaPredicted RBP13.33□□□□□ -0.27
DDX56-206ENST00000446987 GCNAQ96QF7 691 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 DCLK3Q9C098 648 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 NDEL1Q9GZM8 345 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 LMAN2LQ9H0V9 348 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 ASB7Q9H672 318 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 DNAJC17Q9NVM6 304 aaKnown RBP13.33□□□□□ -0.27
DDX56-206ENST00000446987 GCNT4Q9P109 453 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 AJAP1Q9UKB5 411 aaPredicted RBP13.33□□□□□ -0.27
DDX56-206ENST00000446987 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 STRIP2Q9ULQ0 834 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 ERVK-11Q9UQG0 969 aa13.33□□□□□ -0.27
DDX56-206ENST00000446987 K7EPI3 171 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 ATMINO43313 823 aaPredicted RBP13.33□□□□□ -0.28
DDX56-206ENST00000446987 TSHRP16473 764 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 KRT4P19013 534 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 LRPAP1P30533 357 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 ETV4P43268 484 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 ATP6V0D1P61421 351 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 DLG4P78352 724 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 CYP24A1Q07973 514 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 IZUMO3Q5VZ72 239 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 ZNF280DQ6N043 979 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 ADGRD1Q6QNK2 874 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 DDX53Q86TM3 631 aaKnown RBP13.33□□□□□ -0.28
DDX56-206ENST00000446987 GPR180Q86V85 440 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 TRUB1Q8WWH5 349 aaKnown RBP13.33□□□□□ -0.28
DDX56-206ENST00000446987 SLC35C1Q96A29 364 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 GAS2L1Q99501 681 aaPredicted RBP13.33□□□□□ -0.28
DDX56-206ENST00000446987 IMPG2Q9BZV3 1241 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 TLR9Q9NR96 1032 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 ADAM28Q9UKQ2 775 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 DERAQ9Y315 318 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 SLC30A1Q9Y6M5 507 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 SCINQ9Y6U3 715 aa13.33□□□□□ -0.28
DDX56-206ENST00000446987 UNC80Q8N2C7 3258 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 CAPN8A6NHC0 703 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 KMOO15229 486 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 SIN3BO75182 1162 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 IL18RAPO95256 599 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 GZMAP12544 262 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 IGFBP4P22692 258 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 TXNL4AP83876 142 aaKnown RBP13.32□□□□□ -0.28
DDX56-206ENST00000446987 TMEM132DQ14C87 1099 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 LRRC36Q1X8D7 754 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 RGS21Q2M5E4 152 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 LMBRD2Q68DH5 695 aaPredicted RBP13.32□□□□□ -0.28
DDX56-206ENST00000446987 TMEM214Q6NUQ4 689 aaKnown RBP13.32□□□□□ -0.28
DDX56-206ENST00000446987 FUT10Q6P4F1 479 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 TRIML2Q8N7C3 387 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 OR5B17Q8NGF7 314 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 TCP10LQ8TDR4 215 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 ADAMTS16Q8TE57 1224 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 AUTS2Q8WXX7 1259 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 TMEM169Q96HH4 297 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 CLPTM1LQ96KA5 538 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 B3GALT6Q96L58 329 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 MFSD14AQ96MC6 490 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 ZNF641Q96N77 438 aaPredicted RBP13.32□□□□□ -0.28
DDX56-206ENST00000446987 POP1Q99575 1024 aaKnown RBP13.32□□□□□ -0.28
DDX56-206ENST00000446987 AGPAT1Q99943 283 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 HERC2P3Q9BVR0 1158 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 TRNAU1APQ9NX07 287 aaKnown RBP13.32□□□□□ -0.28
DDX56-206ENST00000446987 NCKIPSDQ9NZQ3 722 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 BCAP29Q9UHQ4 241 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 UBQLN1Q9UMX0 589 aaKnown RBP13.32□□□□□ -0.28
DDX56-206ENST00000446987 IFT52Q9Y366 437 aa13.32□□□□□ -0.28
DDX56-206ENST00000446987 HIDE1A8MVS5 230 aa13.31□□□□□ -0.28
DDX56-206ENST00000446987 SPOPO43791 374 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms