RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TTC31Q49AM3 519 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-204ENST00000446876 C22orf39Q6P5X5 142 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 H2AFVQ71UI9 128 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF354CQ86Y25 554 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 AADATQ8N5Z0 425 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 CTNNBL1Q8WYA6 563 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-204ENST00000446876 HSPH1Q92598 858 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 HMCESQ96FZ2 354 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 C6orf106Q9H6K1 298 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-204ENST00000446876 CATSPERBQ9H7T0 1116 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 VPS45Q9NRW7 570 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 IP6K2Q9UHH9 426 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 SARDHQ9UL12 918 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 FCF1Q9Y324 198 aaKnown RBP15.16■□□□□ 0.02
HDAC4-204ENST00000446876 MEI4A8MW99 385 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 RNF103O00237 685 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF821O75541 412 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 RNASEH2AO75792 299 aaKnown RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 CD160O95971 181 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 SLC8A1P32418 973 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 PCK1P35558 622 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 GJC1P36383 396 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 SERPINH1P50454 418 aaKnown RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 SLC25A11Q02978 314 aaKnown RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 ZBTB16Q05516 673 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 PIGHQ14442 188 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 SPDYCQ5MJ68 293 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 RETSATQ6NUM9 610 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 RFX8Q6ZV50 586 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 GPR161Q8N6U8 529 aaKnown RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 NIPA2Q8N8Q9 360 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 C12orf50Q8NA57 414 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 CHST14Q8NCH0 376 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 OR8D1Q8WZ84 308 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF419Q96HQ0 510 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 CELF6Q96J87 481 aaKnown RBP15.15■□□□□ 0.02
HDAC4-204ENST00000446876 MAGEH1Q9H213 219 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 RETREG1Q9H6L5 497 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 OSGEPQ9NPF4 335 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 FSCN3Q9NQT6 498 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 FBXL12Q9NXK8 326 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 PILRBQ9UKJ0 227 aa15.15■□□□□ 0.02
HDAC4-204ENST00000446876 DMXL1Q9Y485 3027 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 PLXNA2O75051 1894 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-204ENST00000446876 TMEM110-MUSTN1A8MSY1 372 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 WASH4PA8MWX3 477 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 RASA4BC9J798 803 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 MYO1FO00160 1098 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 FGF10O15520 208 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-204ENST00000446876 RASA4O43374 803 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 SEMA4FO95754 770 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 CTSLP07711 333 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 RARAP10276 462 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 ETFBP38117 255 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 SSR1P43307 286 aaKnown RBP15.14■□□□□ 0.01
HDAC4-204ENST00000446876 CLCN6P51797 869 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 LMNB2Q03252 620 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 ACAP1Q15027 740 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 AASDHQ4L235 1098 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-204ENST00000446876 DCAF12L1Q5VU92 463 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 SYT12Q8IV01 421 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 RGL4Q8IZJ4 473 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 HDDC3Q8N4P3 179 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 OR2A12Q8NGT7 310 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 SNX19Q92543 992 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 RMDN1Q96DB5 314 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 OMDQ99983 421 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 TM6SF2Q9BZW4 377 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 BTBD1Q9H0C5 482 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 NEUROG2Q9H2A3 272 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.14■□□□□ 0.019e-8■■■■□ 23.7
HDAC4-204ENST00000446876 CWC15Q9P013 229 aaKnown RBP15.14■□□□□ 0.01
HDAC4-204ENST00000446876 MFHAS1Q9Y4C4 1052 aa15.14■□□□□ 0.01
HDAC4-204ENST00000446876 PCDH15Q96QU1 1955 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 CEP250Q9BV73 2442 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 FAM47DPA6NHR8 397 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 MCF2LO15068 1137 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 DAPK3O43293 454 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 KDELR3O43731 214 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 ADH1BP00325 375 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 ERCC2P18074 760 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 C5AR1P21730 350 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 HTR7P34969 479 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 DRD3P35462 400 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 DNA2P51530 1060 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 DPYSQ14117 519 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 DPYSL2Q16555 572 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 RSPO4Q2I0M5 234 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-204ENST00000446876 TRIM61Q5EBN2 209 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 PEAR1Q5VY43 1037 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-204ENST00000446876 DPY19L3Q6ZPD9 716 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 USP30Q70CQ3 517 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 PSTKQ8IV42 348 aaKnown RBP15.13■□□□□ 0.01
HDAC4-204ENST00000446876 UMODL1-AS1Q8N2C9 162 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 NPWQ8N729 165 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 PIP4K2CQ8TBX8 421 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 GRIN3AQ8TCU5 1115 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms