RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 LONP2Q86WA8 852 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 SFTPA1Q8IWL2 248 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 UMODL1-AS1Q8N2C9 162 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 GPR161Q8N6U8 529 aaKnown RBP17.61■□□□□ 0.41
LIME1-202ENST00000444951 ZNF557Q8N988 423 aaPredicted RBP17.61■□□□□ 0.41
LIME1-202ENST00000444951 LRRN4Q8WUT4 740 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 HMCESQ96FZ2 354 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 KLC2Q9H0B6 622 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 RAB23Q9ULC3 237 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 SAR1BQ9Y6B6 198 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 SPAG17Q6Q759 2223 aa17.61■□□□□ 0.41
LIME1-202ENST00000444951 TBC1D3BA6NDS4 549 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 KIF2AO00139 706 aaPredicted RBP17.6■□□□□ 0.41
LIME1-202ENST00000444951 KAT7O95251 611 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 FGGP02679 453 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 APODP05090 189 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 RETP07949 1114 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 PECAM1P16284 738 aaPredicted RBP17.6■□□□□ 0.41
LIME1-202ENST00000444951 TCP1P17987 556 aaKnown RBP17.6■□□□□ 0.41
LIME1-202ENST00000444951 PTPN7P35236 360 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 PAPOLAP51003 745 aaKnown RBP17.6■□□□□ 0.41
LIME1-202ENST00000444951 OXCT1P55809 520 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 LMNB2Q03252 620 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 PAFAH1B3Q15102 231 aaKnown RBP17.6■□□□□ 0.41
LIME1-202ENST00000444951 FUT11Q495W5 492 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 PITRM1Q5JRX3 1037 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 LEKR1Q6ZMV7 388 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 B4GALNT4Q76KP1 1039 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 WDR5BQ86VZ2 330 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 SLC13A5Q86YT5 568 aaPredicted RBP17.6■□□□□ 0.41
LIME1-202ENST00000444951 ARHGAP12Q8IWW6 846 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 LZTR1Q8N653 840 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 EZH1Q92800 747 aaPredicted RBP17.6■□□□□ 0.41
LIME1-202ENST00000444951 FEM1AQ9BSK4 669 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 CIPCQ9C0C6 399 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 RETREG1Q9H6L5 497 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 ATP13A1Q9HD20 1204 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 FBXO10Q9UK96 956 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 KIAA1549LQ6ZVL6 1849 aa17.6■□□□□ 0.41
LIME1-202ENST00000444951 DCDC2BA2VCK2 349 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 ARHGAP42A6NI28 874 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 CBX4O00257 560 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 SNAP91O60641 907 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 TGM2P21980 687 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 GLDCP23378 1020 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 NDST2P52849 883 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 SEC13P55735 322 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 SLC10A2Q12908 348 aaPredicted RBP17.59■□□□□ 0.41
LIME1-202ENST00000444951 PLEKHG6Q3KR16 790 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 MBLAC2Q68D91 279 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 ARHGAP36Q6ZRI8 547 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 AHI1Q8N157 1196 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 SYNPOQ8N3V7 929 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 FAM160A2Q8N612 972 aaPredicted RBP17.59■□□□□ 0.41
LIME1-202ENST00000444951 TERB1Q8NA31 727 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 SORCS1Q8WY21 1168 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 P3H4Q92791 437 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 ARHGEF2Q92974 986 aaKnown RBP17.59■□□□□ 0.41
LIME1-202ENST00000444951 LMLNQ96KR4 655 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 MAGEH1Q9H213 219 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 LRRC19Q9H756 370 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 DTLQ9NZJ0 730 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 CDV3Q9UKY7 258 aaKnown RBP17.59■□□□□ 0.41
LIME1-202ENST00000444951 INTS6Q9UL03 887 aaKnown RBP17.59■□□□□ 0.41
LIME1-202ENST00000444951 EFR3BQ9Y2G0 817 aa17.59■□□□□ 0.41
LIME1-202ENST00000444951 TPRP12270 2363 aaKnown RBP17.58■□□□□ 0.41
LIME1-202ENST00000444951 PRR5-ARHGAP8B1AHC4 643 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 PRRT4C9JH25 899 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 RNF40O75150 1001 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 URI1O94763 535 aaPredicted RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 POLR2EP19388 210 aaKnown RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 HOXA6P31267 233 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 EIF2DP41214 584 aaKnown RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 GRIA2P42262 883 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 CTSOP43234 321 aaPredicted RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 ARHGAP8P85298 464 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 OTUD4Q01804 1114 aaKnown RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 SLC12A1Q13621 1099 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 PARP15Q460N3 678 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 PREPLQ4J6C6 727 aaPredicted RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 AFMIDQ63HM1 303 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 LINGO4Q6UY18 593 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 ADIPOR2Q86V24 386 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 ZC3H18Q86VM9 953 aaKnown RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 PHTF2Q8N3S3 785 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 ATPAF2Q8N5M1 289 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.58■□□□□ 0.4
LIME1-202ENST00000444951 CCNYQ8ND76 341 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 CYB5D2Q8WUJ1 264 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 EXOC4Q96A65 974 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 PRDM16Q9HAZ2 1276 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 SEMA4GQ9NTN9 838 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 HPCAL4Q9UM19 191 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 R3HDM2Q9Y2K5 976 aaKnown RBP17.58■□□□□ 0.4
LIME1-202ENST00000444951 SLC27A6Q9Y2P4 619 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 OR51B4Q9Y5P0 310 aa17.58■□□□□ 0.4
LIME1-202ENST00000444951 LAMA1P25391 3075 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 ANTXRLA6NF34 631 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 PGRMC1O00264 195 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms