RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 NOP2P46087 812 aaKnown RBP17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 SERPINH1P50454 418 aaKnown RBP17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 TPMTP51580 245 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 NDST2P52849 883 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 ARF5P84085 180 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 RPL6Q02878 288 aaKnown RBP17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 TCEAL1Q15170 157 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 TXNRD3NBQ6F5E7 133 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 Q6ZVU0 165 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 STK40Q8N2I9 435 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 OR8D1Q8WZ84 308 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 FAM186AA6NE01 2351 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 ZNF292O60281 2723 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 THADAQ6YHU6 1953 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 K7ERQ8 282 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 SMAD6O43541 496 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 KDELR3O43731 214 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 C7P10643 843 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 RECQLP46063 649 aaPredicted RBP17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 PSMD8P48556 350 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 DHPSP49366 369 aaPredicted RBP17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 CDH6P55285 790 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 GSDMDP57764 484 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 DPYSQ14117 519 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 CST6Q15828 149 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 SPDYCQ5MJ68 293 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 ZFYVE27Q5T4F4 411 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 C22orf39Q6P5X5 142 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 POLNQ7Z5Q5 900 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 MMAAQ8IVH4 418 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 GANCQ8TET4 914 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 HMCESQ96FZ2 354 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 FAM129BQ96TA1 746 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 CEP44Q9C0F1 390 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 PABPC3Q9H361 631 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 NOL6Q9H6R4 1146 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 PCDH18Q9HCL0 1135 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 CD93Q9NPY3 652 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 NCKAP1Q9Y2A7 1128 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 SDK1Q7Z5N4 2213 aa17.82■□□□□ 0.44
SMARCAL1-209ENST00000444508 ABCA7Q8IZY2 2146 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 ARHGAP42A6NI28 874 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 ALOX15BO15296 676 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 BUB1O43683 1085 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 EPN2O95208 641 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 ADH1BP00325 375 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 IL1BP01584 269 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 IGLV3-19P01714 112 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 SLC1A1P43005 524 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 SERINC3Q13530 473 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 TMCO3Q6UWJ1 677 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 RAD9BQ6WBX8 426 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 FAM124AQ86V42 546 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 CPNE8Q86YQ8 564 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 MAP7D3Q8IWC1 876 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 TMEFF1Q8IYR6 380 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 LZTR1Q8N653 840 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 KCTD6Q8NC69 237 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 TOE1Q96GM8 510 aaKnown RBP17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 CELF6Q96J87 481 aaKnown RBP17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 CSPG4P5Q96PW8 444 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 RCOR3Q9P2K3 495 aaPredicted RBP17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 PCDHGA5Q9Y5G8 931 aa17.81■□□□□ 0.44
SMARCAL1-209ENST00000444508 GVINP1Q7Z2Y8 2422 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 C1QTNF3-AMACRE9PGA6 284 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 MCF2LO15068 1137 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 MID1O15344 667 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 HOXD11P31277 338 aaPredicted RBP17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 SLC8A1P32418 973 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 DNA2P51530 1060 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 HADHBP55084 474 aaKnown RBP17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 TAS2R40P59535 323 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 CREB5Q02930 508 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 PDK2Q15119 407 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 FAM46CQ5VWP2 391 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 USP30Q70CQ3 517 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 ARMCX6Q7L4S7 300 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 DCLK2Q8N568 766 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 PCDH20Q8N6Y1 951 aaKnown RBP17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 CASKIN2Q8WXE0 1202 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 OMDQ99983 421 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 CALN1Q9BXU9 219 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 TNKS2Q9H2K2 1166 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 LRRC19Q9H756 370 aa17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 WSB2Q9NYS7 404 aaPredicted RBP17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 FCF1Q9Y324 198 aaKnown RBP17.8■□□□□ 0.44
SMARCAL1-209ENST00000444508 A0A0A6YYK5 440 aaPredicted RBP17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 GOLGA6L3A6NEY3 463 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 DFFAO00273 331 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 SPOPO43791 374 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 C5AR1P21730 350 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 AMPD1P23109 780 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 SERPINB6P35237 376 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 PAPOLAP51003 745 aaKnown RBP17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 ATP13A4Q4VNC1 1196 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 LYSMD4Q5XG99 296 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 LEKR1Q6ZMV7 388 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 CYP2U1Q7Z449 544 aa17.79■□□□□ 0.44
SMARCAL1-209ENST00000444508 KIAA1328Q86T90 577 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms