RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CLCN6P51797 869 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 RPL7AP62424 266 aaKnown RBP19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 RACK1P63244 317 aaKnown RBP19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 SCAPQ12770 1279 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 KLHL40Q2TBA0 621 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 KCNT1Q5JUK3 1230 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 AGBL4Q5VU57 503 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 FAM46CQ5VWP2 391 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 LRSAM1Q6UWE0 723 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 LAYNQ6UX15 382 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 LINGO4Q6UY18 593 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 DSG4Q86SJ6 1040 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 MCOLN2Q8IZK6 566 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 ATP11CQ8NB49 1132 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 OR14C36Q8NHC7 312 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 PIP4K2CQ8TBX8 421 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 CAMK1GQ96NX5 476 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 ACE2Q9BYF1 805 aaPredicted RBP19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 RETREG1Q9H6L5 497 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 TAS2R14Q9NYV8 317 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 ANKRD6Q9Y2G4 727 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 SNX11Q9Y5W9 270 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 CEP295Q9C0D2 2601 aa19.36■□□□□ 0.69
HMGB3P22-201ENST00000442010 SPAARA0A1B0GVQ0 90 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 LRRC53A6NM62 1247 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 RNF103O00237 685 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 CCP110O43303 1012 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 LATO43561 262 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 PLRG1O43660 514 aaKnown RBP19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 CBFA2T3O75081 653 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 CD160O95971 181 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 ZNF143P52747 638 aaPredicted RBP19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 ARF5P84085 180 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 GNA12Q03113 381 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 CNTN1Q12860 1018 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 NR1I3Q14994 352 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 TEAD4Q15561 434 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 FILIP1LQ4L180 1135 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 E4F1Q66K89 784 aaPredicted RBP19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 KDM4CQ9H3R0 1056 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 TM7SF3Q9NS93 570 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 TMEM248Q9NWD8 314 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 AIPL1Q9NZN9 384 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 CACNA1BQ00975 2339 aa19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 ARID1BQ8NFD5 2236 aaPredicted RBP19.35■□□□□ 0.69
HMGB3P22-201ENST00000442010 CXorf51AA0A1B0GTR3 108 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 C1QTNF3-AMACRE9PGA6 284 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 WNT9AO14904 365 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 RTN2O75298 545 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 WNT1P04628 370 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 PLEKP08567 350 aaPredicted RBP19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 RHOQP17081 205 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 CTSKP43235 329 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 PPP2CBP62714 309 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 PPP2CAP67775 309 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 HNRNPDQ14103 355 aaKnown RBP19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 DNAJC24Q6P3W2 148 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 C22orf39Q6P5X5 142 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 NAXDQ8IW45 347 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 DRC7Q8IY82 874 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 TMIEQ8NEW7 156 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 VCPIP1Q96JH7 1222 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 SLC6A18Q96N87 628 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 MCEEQ96PE7 176 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 ATP13A1Q9HD20 1204 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 ARHGAP20Q9P2F6 1191 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 TPX2Q9ULW0 747 aaKnown RBP19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 PCDHGB2Q9Y5G2 931 aa19.34■□□□□ 0.69
HMGB3P22-201ENST00000442010 PTPRBP23467 1997 aa19.33■□□□□ 0.69
HMGB3P22-201ENST00000442010 A0A1W2PR77 199 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 SYCE3A1L190 88 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 CBX4O00257 560 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 VILLO15195 856 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 TOP3BO95985 862 aaKnown RBP19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 TNFAIP3P21580 790 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 CHRNA3P32297 505 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 ACVRL1P37023 503 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 PRKCIP41743 596 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 MAPKAPK2P49137 400 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 SERPINH1P50454 418 aaKnown RBP19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 TAS2R38P59533 333 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 SIM1P81133 766 aaPredicted RBP19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 OGDHQ02218 1023 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 SLC20A2Q08357 652 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 FOXC1Q12948 553 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 ZNF423Q2M1K9 1284 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 PIP5KL1Q5T9C9 394 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 RETSATQ6NUM9 610 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 SLFN11Q7Z7L1 901 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 CHST14Q8NCH0 376 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 ARHGEF2Q92974 986 aaKnown RBP19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 SPON2Q9BUD6 331 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 EDEM3Q9BZQ6 932 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 CEP44Q9C0F1 390 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 HAUS4Q9H6D7 363 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 CBX8Q9HC52 389 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 ACTL7AQ9Y615 435 aa19.33■□□□□ 0.68
HMGB3P22-201ENST00000442010 PLXNB3Q9ULL4 1909 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3DA0A087WVF3 549 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms