RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MGAT4CQ9UBM8 478 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 INTS6Q9UL03 887 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 FAM25EA8MYX2 175 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 IFNL4K9M1U5 179 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 RFXAPO00287 272 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 FYB1O15117 783 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SEC31AO94979 1220 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SCAF4O95104 1147 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 TUBBP07437 444 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 CHRM4P08173 479 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 AGTR2P50052 363 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 HSD17B4P51659 736 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SHC2P98077 582 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 PLIN5Q00G26 463 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 COX10Q12887 443 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SHROOM1Q2M3G4 852 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZNF385BQ569K4 471 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ARMC4Q5T2S8 1044 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 IRGCQ6NXR0 463 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SGMS1Q86VZ5 419 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ADGRF3Q8IZF5 1079 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 LGI4Q8N135 537 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 TEX9Q8N6V9 391 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 PNPLA1Q8N8W4 532 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZBTB8BQ8NAP8 495 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 AVL9Q8NBF6 648 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 TEKT1Q969V4 418 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 BOD1Q96IK1 185 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 APOL6Q9BWW8 343 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 GLIS2Q9BZE0 524 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 KLHL4Q9C0H6 718 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ABCF3Q9NUQ8 709 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 DKK3Q9UBP4 350 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 B3GNT3Q9Y2A9 372 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ARAP1Q96P48 1450 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 XDHP47989 1333 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 FOXS1O43638 330 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 LIASO43766 372 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 NCR1O76036 304 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 TGDSO95455 350 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GALTP07902 379 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 CDH2P19022 906 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 CTGFP29279 349 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SCNN1GP51170 649 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SH3BGRP55822 239 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC37A1P57057 533 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SUMO2P61956 95 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 TXNL4AP83876 142 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMEM154Q6P9G4 183 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 C17orf99Q6UX52 265 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 KYAT3Q6YP21 454 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC39A5Q6ZMH5 540 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 FAM83HQ6ZRV2 1179 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC46A3Q7Z3Q1 461 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLFN11Q7Z7L1 901 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GALNT7Q86SF2 657 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 ARHGAP12Q8IWW6 846 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 POC5Q8NA72 575 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 NOC3LQ8WTT2 800 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SMARCE1Q969G3 411 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SYAP1Q96A49 352 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC22A18Q96BI1 424 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GPATCH1Q9BRR8 931 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 USP29Q9HBJ7 922 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 C20orf141Q9NUB4 165 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 ABHD10Q9NUJ1 306 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GABRQQ9UN88 632 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZFR2Q9UPR6 939 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 NOX1Q9Y5S8 564 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 ADAMTS20P59510 1910 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SMARCA2P51531 1590 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 A8MZ25 164 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 VWC2LB2RUY7 222 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 CES2O00748 559 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 LAMTOR5O43504 91 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMPRSS11DO60235 418 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 CEP104O60308 925 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 PAGE4O60829 102 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 TBCAO75347 108 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 MATN1P21941 496 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GJC1P36383 396 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 PTPN9P43378 593 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 DIO1P49895 249 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GPC5P78333 572 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GAB1Q13480 694 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 FRG1Q14331 258 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GPR162Q16538 588 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 NT5DC1Q5TFE4 455 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 KAZNQ674X7 775 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 PTCHD4Q6ZW05 846 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 IQCA1Q86XH1 822 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 AFAP1L1Q8TED9 768 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 POMGNT1Q8WZA1 660 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 VPS33AQ96AX1 596 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 FKBP10Q96AY3 582 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 CINPQ9BW66 212 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 MRPL9Q9BYD2 267 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 ANKRD2Q9GZV1 360 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms