RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ANKRD36BP1Q96IX9 119 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 CCDC138Q96M89 665 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 C20orf96Q9NUD7 363 aaPredicted RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 ADA2Q9NZK5 511 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 PLIN3O60664 434 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 PRKCBP05771 671 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 RALBP11234 206 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 MYL6P60660 151 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 ART3Q13508 389 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 UNC5BQ8IZJ1 945 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 PCYOX1LQ8NBM8 494 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 VCPIP1Q96JH7 1222 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 MARK4Q96L34 752 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 HERC2P3Q9BVR0 1158 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 NPLQ9BXD5 320 aaPredicted RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 CALN1Q9BXU9 219 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 PCDHAC1Q9H158 963 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 FAM96AQ9H5X1 160 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 NOL11Q9H8H0 719 aaKnown RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 POLR1BQ9H9Y6 1135 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 CCDC162PA2VCL2 907 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 FAM47E-STBD1D6RA91 191 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 MSCO60682 206 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 ERBB2P04626 1255 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 APRTP07741 180 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 TGFB3P10600 412 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 PRKCHP24723 683 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 IL1R2P27930 398 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 PTPN7P35236 360 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 RAB39AQ14964 217 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 EEF1DP3Q658K8 133 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 IGFN1Q86VF2 1251 aa17.08■□□□□ 0.33
PMS1-213ENST00000441310 SCHIP1Q9P0W5 487 aaPredicted RBP17.08■□□□□ 0.33
PMS1-213ENST00000441310 CNOT11Q9UKZ1 510 aaKnown RBP17.08■□□□□ 0.33
PMS1-213ENST00000441310 CEP350Q5VT06 3117 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 ZBTB42B2RXF5 422 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 MAP3K6O95382 1288 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 HSPA4LO95757 839 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 C8BP07358 591 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 GRM5P41594 1212 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 ARPC4P59998 168 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 NEDD8Q15843 81 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 MAP1SQ66K74 1059 aaPredicted RBP17.08■□□□□ 0.32
PMS1-213ENST00000441310 TMEM192Q8IY95 271 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 MINDY3Q9H8M7 445 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 TCF7L2Q9NQB0 619 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 STYXL1Q9Y6J8 313 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 RGSL1A5PLK6 1076 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 A6NL46 340 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 H7C0C1 242 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 TPP1O14773 563 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 MAP4P27816 1152 aaKnown RBP17.08■□□□□ 0.32
PMS1-213ENST00000441310 ATP5OP48047 213 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 ORC1Q13415 861 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 DPYSQ14117 519 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 EFCAB12Q6NXP0 572 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 ZBTB49Q6ZSB9 765 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 CADM3Q8N126 398 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 SLC10A4Q96EP9 437 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 VTA1Q9NP79 307 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 ZNF358Q9NW07 568 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 NXF1Q9UBU9 619 aaKnown RBP17.08■□□□□ 0.32
PMS1-213ENST00000441310 ST14Q9Y5Y6 855 aa17.08■□□□□ 0.32
PMS1-213ENST00000441310 ZNF701M0R085 212 aaPredicted RBP17.07■□□□□ 0.32
PMS1-213ENST00000441310 KRT19P08727 400 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 PSMA2P25787 234 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 ROR1Q01973 937 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 TAF5Q15542 800 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 PPM1JQ5JR12 505 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 VASH1Q7L8A9 365 aaPredicted RBP17.07■□□□□ 0.32
PMS1-213ENST00000441310 SIX6OS1Q8N1H7 587 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 MOCOSQ96EN8 888 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 MRPL4Q9BYD3 311 aaKnown RBP17.07■□□□□ 0.32
PMS1-213ENST00000441310 SBF1O95248 1867 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 SLC25A27O95847 323 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 S100BP04271 92 aaPredicted RBP17.07■□□□□ 0.32
PMS1-213ENST00000441310 CAPNS1P04632 268 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 ACO1P21399 889 aaKnown RBP17.07■□□□□ 0.32
PMS1-213ENST00000441310 MMP8P22894 467 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 KDELR1P24390 212 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 TRPC3Q13507 836 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 GPAT2Q6NUI2 795 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 EPGNQ6UW88 154 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 MPP5Q8N3R9 675 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 CGRRF1Q99675 332 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 NPAS2Q99743 824 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 CDH19Q9H159 772 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 GINS2Q9Y248 185 aa17.07■□□□□ 0.32
PMS1-213ENST00000441310 PAPPA2Q9BXP8 1791 aa17.06■□□□□ 0.32
PMS1-213ENST00000441310 KPNA4O00629 521 aaPredicted RBP17.06■□□□□ 0.32
PMS1-213ENST00000441310 NOL3O60936 208 aaKnown RBP17.06■□□□□ 0.32
PMS1-213ENST00000441310 KCNH1O95259 989 aa17.06■□□□□ 0.32
PMS1-213ENST00000441310 CLIC3O95833 236 aa17.06■□□□□ 0.32
PMS1-213ENST00000441310 CYP2R1Q6VVX0 501 aa17.06■□□□□ 0.32
PMS1-213ENST00000441310 CHST15Q7LFX5 561 aaPredicted RBP17.06■□□□□ 0.32
PMS1-213ENST00000441310 TMCO5AQ8N6Q1 288 aa17.06■□□□□ 0.32
PMS1-213ENST00000441310 KCTD6Q8NC69 237 aa17.06■□□□□ 0.32
PMS1-213ENST00000441310 TRUB1Q8WWH5 349 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms