RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 DNTTP04053 509 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 CD48P09326 243 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 ARL4AP40617 200 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 CDH6P55285 790 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 KRT81Q14533 505 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 ELAVL3Q14576 367 aaKnown RBP18.42■□□□□ 0.54
CPSF4-205ENST00000440514 CST6Q15828 149 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 PARP15Q460N3 678 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 POLNQ7Z5Q5 900 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 TMEFF1Q8IYR6 380 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 DEFB119Q8N690 84 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 ACRBPQ8NEB7 543 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 CSPG4P5Q96PW8 444 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 TNKS2Q9H2K2 1166 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 LRRC19Q9H756 370 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 ITM2CQ9NQX7 267 aa18.42■□□□□ 0.54
CPSF4-205ENST00000440514 ABCA7Q8IZY2 2146 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 RCCD1A6NED2 376 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 MID1O15344 667 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 KDELR3O43731 214 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 RHOBTB1O94844 696 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 EPN2O95208 641 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 AMPD1P23109 780 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 CD6P30203 668 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 HOXD11P31277 338 aaPredicted RBP18.41■□□□□ 0.54
CPSF4-205ENST00000440514 HCAR3P49019 387 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 DHPSP49366 369 aaPredicted RBP18.41■□□□□ 0.54
CPSF4-205ENST00000440514 CLCN6P51797 869 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 ZNF135P52742 658 aaPredicted RBP18.41■□□□□ 0.54
CPSF4-205ENST00000440514 YBEYP58557 167 aaPredicted RBP18.41■□□□□ 0.54
CPSF4-205ENST00000440514 RPL6Q02878 288 aaKnown RBP18.41■□□□□ 0.54
CPSF4-205ENST00000440514 SERINC3Q13530 473 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 TCEAL1Q15170 157 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 OR8D1Q8WZ84 308 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 TSC1Q92574 1164 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 PABPC3Q9H361 631 aaKnown RBP18.41■□□□□ 0.54
CPSF4-205ENST00000440514 ETNK2Q9NVF9 386 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 SERGEFQ9UGK8 458 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 HPCAL4Q9UM19 191 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 HYOU1Q9Y4L1 999 aa18.41■□□□□ 0.54
CPSF4-205ENST00000440514 RNASEH1O60930 286 aaKnown RBP18.4■□□□□ 0.54
CPSF4-205ENST00000440514 IPO7O95373 1038 aaKnown RBP18.4■□□□□ 0.54
CPSF4-205ENST00000440514 IGLV3-19P01714 112 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 RETP07949 1114 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 C7P10643 843 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 ARHGAP25P42331 645 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 PTGER3P43115 390 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 NOP2P46087 812 aaKnown RBP18.4■□□□□ 0.54
CPSF4-205ENST00000440514 ARSEP51690 589 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 NDST2P52849 883 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 METAP1P53582 386 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 ZBTB16Q05516 673 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 MMRN1Q13201 1228 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 CCDC6Q16204 474 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 TTC31Q49AM3 519 aaPredicted RBP18.4■□□□□ 0.54
CPSF4-205ENST00000440514 SLC36A4Q6YBV0 504 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 LPCAT2Q7L5N7 544 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 ARHGAP12Q8IWW6 846 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 TP53INP2Q8IXH6 220 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 TOE1Q96GM8 510 aaKnown RBP18.4■□□□□ 0.54
CPSF4-205ENST00000440514 SLC39A8Q9C0K1 460 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 GOLPH3Q9H4A6 298 aa18.4■□□□□ 0.54
CPSF4-205ENST00000440514 WSB2Q9NYS7 404 aaPredicted RBP18.4■□□□□ 0.54
CPSF4-205ENST00000440514 ATXN2Q99700 1313 aaKnown RBP18.4■□□□□ 0.54
CPSF4-205ENST00000440514 CEP192Q8TEP8 1941 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 PIEZO1Q92508 2521 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 BUB1O43683 1085 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 BUB1BO60566 1050 aaPredicted RBP18.39■□□□□ 0.53
CPSF4-205ENST00000440514 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
CPSF4-205ENST00000440514 IL1BP01584 269 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 KRT7P08729 469 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 HADHBP55084 474 aaKnown RBP18.39■□□□□ 0.53
CPSF4-205ENST00000440514 DPYSL3Q14195 570 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 POM121L1PQ3SYA9 428 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 AFMIDQ63HM1 303 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 TXLNBQ8N3L3 684 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 CHST14Q8NCH0 376 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 OR2A12Q8NGT7 310 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 FAM71BQ8TC56 605 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 GANCQ8TET4 914 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 LOXL4Q96JB6 756 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 DESI2Q9BSY9 194 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 CALN1Q9BXU9 219 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 TM6SF2Q9BZW4 377 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 CEP44Q9C0F1 390 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 ARRDC1-AS1Q9H2J1 176 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 PARD6AQ9NPB6 346 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 SARDHQ9UL12 918 aa18.39■□□□□ 0.53
CPSF4-205ENST00000440514 A0A1W2PP55 124 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 DFFAO00273 331 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 PLK4O00444 970 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 MCF2LO15068 1137 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 ALOX15BO15296 676 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 NDUFS2O75306 463 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 ADH1BP00325 375 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 CTSLP07711 333 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 TNNT1P13805 278 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 SLC8A1P32418 973 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 ACSL1P33121 698 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms