RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 LZTFL1Q9NQ48 299 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 PRSS16Q9NQE7 514 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 MFHAS1Q9Y4C4 1052 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 CCDC66A2RUB6 948 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 C3orf70A6NLC5 250 aaPredicted RBP18.65■□□□□ 0.58
PTX4-202ENST00000440447 SIN3BO75182 1162 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 ZRANB2O95218 330 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTX4-202ENST00000440447 GABRG2P18507 467 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 CTNNA1P35221 906 aaKnown RBP18.65■□□□□ 0.58
PTX4-202ENST00000440447 SERPINH1P50454 418 aaKnown RBP18.65■□□□□ 0.58
PTX4-202ENST00000440447 NT5DC3Q86UY8 548 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 RCOR2Q8IZ40 523 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 NETO2Q8NC67 525 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 MDGA1Q8NFP4 955 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.65■□□□□ 0.58
PTX4-202ENST00000440447 FRS2Q8WU20 508 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 ATOH1Q92858 354 aaPredicted RBP18.65■□□□□ 0.58
PTX4-202ENST00000440447 PRDM16Q9HAZ2 1276 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 PCDHGA2Q9Y5H1 932 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 PCDHA3Q9Y5H8 950 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 CAPN6Q9Y6Q1 641 aa18.65■□□□□ 0.58
PTX4-202ENST00000440447 CACNA1IQ9P0X4 2223 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 K7ERQ8 282 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 SMAD6O43541 496 aaKnown RBP18.64■□□□□ 0.57
PTX4-202ENST00000440447 NDUFV2P19404 249 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 CTNNA2P26232 953 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 MARCKSL1P49006 195 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 PAFAH1B3Q15102 231 aaKnown RBP18.64■□□□□ 0.57
PTX4-202ENST00000440447 C9orf64Q5T6V5 341 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 NCBP2-AS2Q69YL0 99 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 ZC3H14Q6PJT7 736 aaKnown RBP18.64■□□□□ 0.57
PTX4-202ENST00000440447 MFSD7Q6UXD7 560 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 LEKR1Q6ZMV7 388 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 METTL3Q86U44 580 aaKnown RBP18.64■□□□□ 0.57
PTX4-202ENST00000440447 TMPRSS6Q8IU80 811 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 PQLC3Q8N755 202 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 EXD1Q8NHP7 514 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 CASKIN2Q8WXE0 1202 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 KRT35Q92764 455 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 PTPRN2Q92932 1015 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 RBM41Q96IZ5 413 aaKnown RBP18.64■□□□□ 0.57
PTX4-202ENST00000440447 MRGPRX1Q96LB2 322 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 CCDC114Q96M63 670 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 TPSD1Q9BZJ3 242 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 CEP44Q9C0F1 390 aa18.64■□□□□ 0.57
PTX4-202ENST00000440447 MIF4GDA9UHW6 222 aaKnown RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 RNASEH1O60930 286 aaKnown RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 FTCDO95954 541 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 VAV1P15498 845 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 ZFXP17010 805 aaPredicted RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 COPAP53621 1224 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 RWDD2BP57060 319 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 C22orf39Q6P5X5 142 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 KIAA1324Q6UXG2 1013 aaKnown RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 SPOCD1Q6ZMY3 1216 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 Q6ZVU0 165 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 RFX6Q8HWS3 928 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 CCDC50Q8IVM0 306 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 UBL4BQ8N7F7 174 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 ZBTB44Q8NCP5 570 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 PRCCQ92733 491 aaPredicted RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 SIPA1Q96FS4 1042 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 MKRN2Q9H000 416 aaKnown RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 SP110Q9HB58 689 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 UBA2Q9UBT2 640 aaPredicted RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 IPO11Q9UI26 975 aaKnown RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 FCF1Q9Y324 198 aaKnown RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 FARP1Q9Y4F1 1045 aaPredicted RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 ACTL7AQ9Y615 435 aa18.63■□□□□ 0.57
PTX4-202ENST00000440447 MUC22E2RYF6 1773 aaPredicted RBP18.63■□□□□ 0.57
PTX4-202ENST00000440447 MYO18AQ92614 2054 aaKnown RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 J3KR12 359 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 APOL1O14791 398 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 ZSCAN12O43309 604 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 MFSD11O43934 449 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 BNIP3LO60238 219 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 PRAMEF11O60813 436 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 CD160O95971 181 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 CNR2P34972 360 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 CDKN2BP42772 138 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 RECQLP46063 649 aaPredicted RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 IL10RBQ08334 325 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 BYSLQ13895 437 aaKnown RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 TFDP2Q14188 446 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 ELAVL3Q14576 367 aaKnown RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 USP39Q53GS9 565 aaKnown RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 INO80DQ53TQ3 878 aaPredicted RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 ZNF776Q68DI1 518 aaPredicted RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 LRRC49Q8IUZ0 686 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 TP53INP2Q8IXH6 220 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 STK40Q8N2I9 435 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 ATPAF2Q8N5M1 289 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 PCDH20Q8N6Y1 951 aaKnown RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 UBE2Q2Q8WVN8 375 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 OR8D1Q8WZ84 308 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 ISG20Q96AZ6 181 aaKnown RBP18.62■□□□□ 0.57
PTX4-202ENST00000440447 ALS2CR12Q96Q35 445 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 SLC6A17Q9H1V8 727 aa18.62■□□□□ 0.57
PTX4-202ENST00000440447 ACADMP11310 421 aa18.61■□□□□ 0.57
PTX4-202ENST00000440447 CETN2P41208 172 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms