RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-213	ENST00000440293	FAM72A	Q5TYM5	149 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	MANEAL	Q5VSG8	457 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	FAM72D	Q6L9T8	149 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	RWDD4	Q6NW29	188 aa	Known RBP	18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	H2AFV	Q71UI9	128 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	TFAP2D	Q7Z6R9	452 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	FAM72B	Q86X60	149 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	RGL4	Q8IZJ4	473 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	CHCHD4	Q8N4Q1	142 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	DEFB119	Q8N690	84 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	ARFGAP1	Q8N6T3	406 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	OR52K2	Q8NGK3	314 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	TBC1D31	Q96DN5	1066 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	ERLEC1	Q96DZ1	483 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	MUC3B	Q9H195	1237 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	WSB2	Q9NYS7	404 aa	Predicted RBP	18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	USP36	Q9P275	1121 aa	Known RBP	18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	PCSK1N	Q9UHG2	260 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	LHX6	Q9UPM6	363 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	OR51B4	Q9Y5P0	310 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	GON4L	Q3T8J9	2241 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	PRPSAP2	O60256	369 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	LRIG2	O94898	1065 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	HLA-E	P13747	358 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	RHOQ	P17081	205 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	CTSO	P43234	321 aa	Predicted RBP	18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	FAM193A	P78312	1265 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	KRT83	P78385	493 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	COL9A2	Q14055	689 aa	Predicted RBP	18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	ERMARD	Q5T6L9	678 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	IL27RA	Q6UWB1	636 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	ZNF783	Q6ZMS7	281 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	PYROXD2	Q8N2H3	581 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	ARHGEF26	Q96DR7	871 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	MRGPRX3	Q96LB0	322 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	PCED1A	Q9H1Q7	454 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	FSCN3	Q9NQT6	498 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	IP6K2	Q9UHH9	426 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	VPS28	Q9UK41	221 aa		18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	APOBEC2	Q9Y235	224 aa	Known RBP	18.52	■□□□□ 0.56
HDAC7-213	ENST00000440293	ILVBL	A1L0T0	632 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	MYO1F	O00160	1098 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	SH3BP5	O60239	455 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	IGLV3-19	P01714	112 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	C7	P10643	843 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	MIP	P30301	263 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	PCK1	P35558	622 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	CAMK2G	Q13555	558 aa	Predicted RBP	18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	TMPRSS6	Q8IU80	811 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	PSTK	Q8IV42	348 aa	Known RBP	18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	NAXD	Q8IW45	347 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	MYO19	Q96H55	970 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	RPL10L	Q96L21	214 aa	Known RBP	18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	EPAS1	Q99814	870 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	PRDM16	Q9HAZ2	1276 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	CTTNBP2NL	Q9P2B4	639 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	UVRAG	Q9P2Y5	699 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	ZNF212	Q9UDV6	495 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	SLCO3A1	Q9UIG8	710 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	ANAPC7	Q9UJX3	599 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	CACNA1E	Q15878	2313 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	ZFYVE26	Q68DK2	2539 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	BAHCC1	Q9P281	2608 aa		18.51	■□□□□ 0.55
HDAC7-213	ENST00000440293	EIF3CL	B5ME19	914 aa	Known RBP	18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	CREB3	O43889	395 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	LRCH4	O75427	683 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	TMEM253	P0C7T8	217 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	EPHB2	P29323	1055 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	MAPKAPK2	P49137	400 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	VASP	P50552	380 aa	Predicted RBP	18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	HNRNPA1L2	Q32P51	320 aa	Known RBP	18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	BOLA3	Q53S33	107 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	CCNI2	Q6ZMN8	369 aa	Predicted RBP	18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	DBX2	Q6ZNG2	339 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	NLRP14	Q86W24	1093 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	ZNF366	Q8N895	744 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	OR2T3	Q8NH03	318 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	PANX2	Q96RD6	677 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	EIF3C	Q99613	913 aa	Known RBP	18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	PACSIN1	Q9BY11	444 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	FBRS	Q9HAH7	460 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	PRSS16	Q9NQE7	514 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	SPTLC3	Q9NUV7	552 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	TMEM248	Q9NWD8	314 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	SLC25A13	Q9UJS0	675 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	AP4E1	Q9UPM8	1137 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	PCDHGB2	Q9Y5G2	931 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293	FREM2	Q5SZK8	3169 aa		18.5	■□□□□ 0.55
HDAC7-213	ENST00000440293		A0A0D9SEW6	157 aa		18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	TARSL2	A2RTX5	802 aa	Known RBP	18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	TTC34	A8MYJ7	566 aa		18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	TAF4	O00268	1085 aa		18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	CBFA2T3	O75081	653 aa		18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	FTH1P19	P0C7X4	201 aa		18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	HTR7	P34969	479 aa		18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	ETFB	P38117	255 aa		18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	NUMB	P49757	651 aa		18.49	■□□□□ 0.55
HDAC7-213	ENST00000440293	GNA12	Q03113	381 aa		18.49	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms