RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 PGAM4Q8N0Y7 254 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 ZNF513Q8N8E2 541 aaPredicted RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 SMYD1Q8NB12 490 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 ZNF669Q96BR6 464 aaPredicted RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 KCTD15Q96SI1 283 aaPredicted RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 APOL2Q9BQE5 337 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 INO80BQ9C086 356 aaPredicted RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 ILKAPQ9H0C8 392 aaPredicted RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 MINDY3Q9H8M7 445 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 HESX1Q9UBX0 185 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 SH3GLB1Q9Y371 365 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 TCAF2A6NFQ2 919 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 GPR25O00155 361 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 PGAM1P18669 254 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 GP5P40197 560 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 MAPK10P53779 464 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 GOLGA7BQ2TAP0 167 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 NCBP2-AS2Q69YL0 99 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 CATSPER1Q8NEC5 780 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 RP9Q8TA86 221 aaKnown RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 LZICQ8WZA0 190 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 SLCO4A1Q96BD0 722 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 MFSD3Q96ES6 412 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 PTPN18Q99952 460 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 FAM96AQ9H5X1 160 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 NMRAL1Q9HBL8 299 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 COPG1Q9Y678 874 aaKnown RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 SYNJ2BP-COX16A0A087WUM0 186 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 CCL15-CCL14A0A0B4J2E2 113 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 LACTBL1A8MY62 500 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 E7ENX8 843 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 H3BNH8 94 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 CLIC3O95833 236 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 IQCF3P0C7M6 154 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 PPARGP37231 505 aaPredicted RBP13.78□□□□□ -0.2
PCNX3-202ENST00000439247 ALDH3B2P48448 385 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 PTK2BQ14289 1009 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 ZNF460Q14592 562 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 CCL15Q16663 113 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 PPP1R26Q5T8A7 1209 aaPredicted RBP13.78□□□□□ -0.2
PCNX3-202ENST00000439247 OLFML1Q6UWY5 402 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 RPS27LQ71UM5 84 aaKnown RBP13.78□□□□□ -0.2
PCNX3-202ENST00000439247 FASTKD5Q7L8L6 764 aaKnown RBP13.78□□□□□ -0.2
PCNX3-202ENST00000439247 FAM47BQ8NA70 645 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 ZBTB8BQ8NAP8 495 aaPredicted RBP13.78□□□□□ -0.2
PCNX3-202ENST00000439247 QKIQ96PU8 341 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCNX3-202ENST00000439247 CSPG4P5Q96PW8 444 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 OMDQ99983 421 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 SPATC1LQ9H0A9 340 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 ARMC7Q9H6L4 198 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 PFDN4Q9NQP4 134 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 FAIMQ9NVQ4 179 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 COX16Q9P0S2 106 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 SNX9Q9Y5X1 595 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 SIP14410 1827 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 KCNK1O00180 336 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 RNF103O00237 685 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 NRP1O14786 923 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 HDAC3O15379 428 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 MAFGO15525 162 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 MFSD11O43934 449 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 SETSIPP0DME0 302 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 UGT1A6P19224 532 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 OAZ1P54368 228 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 HMBOX1Q6NT76 420 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 CARM1Q86X55 608 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 CCNYQ8ND76 341 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 NDRG1Q92597 394 aaKnown RBP13.78□□□□□ -0.2
PCNX3-202ENST00000439247 SLC39A3Q9BRY0 314 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
PCNX3-202ENST00000439247 ZNF232Q9UNY5 417 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 AP4S1Q9Y587 144 aa13.78□□□□□ -0.2
PCNX3-202ENST00000439247 XPOTO43592 962 aaKnown RBP13.77□□□□□ -0.2
PCNX3-202ENST00000439247 TIPRLO75663 272 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 SBK3P0C264 359 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 RPL14P50914 215 aaKnown RBP13.77□□□□□ -0.2
PCNX3-202ENST00000439247 INSCQ1MX18 579 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 CCDC153Q494R4 210 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 SPRYD7Q5W111 196 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 XKR5Q6UX68 686 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 PATL1Q86TB9 770 aaKnown RBP13.77□□□□□ -0.2
PCNX3-202ENST00000439247 TTC30AQ86WT1 665 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 FIBCD1Q8N539 461 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 URGCPQ8TCY9 931 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 RBBP8Q99708 897 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 ZNF670Q9BS34 389 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 TASP1Q9H6P5 420 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 ACAD9Q9H845 621 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 SLC39A10Q9ULF5 831 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 AP4E1Q9UPM8 1137 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 MYRFQ9Y2G1 1151 aa13.77□□□□□ -0.2
PCNX3-202ENST00000439247 A0A0A0MRY4 1105 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 C9IYK1 514 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 PDHXO00330 501 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 TPH1P17752 444 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 CD247P20963 164 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 ABCD1P33897 745 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 CREB5Q02930 508 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms