RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SYCP1Q15431 976 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 CDO1Q16878 200 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 ARL13BQ3SXY8 428 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 SETMARQ53H47 684 aaPredicted RBP18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 AGBL4Q5VU57 503 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 LINGO4Q6UY18 593 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 TRIM72Q6ZMU5 477 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 ARCQ7LC44 396 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 GATAD2AQ86YP4 633 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 OXR1Q8N573 874 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 EMC1Q8N766 993 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 C11orf70Q9BRQ4 267 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 PREBQ9HCU5 417 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 ANO10Q9NW15 660 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 FANCLQ9NW38 375 aa18.89■□□□□ 0.61
AC004540.1-201ENST00000439120 IGLV3-10A0A075B6K4 115 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 A0A0D9SEW6 157 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 A0A1W2PR77 199 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 ILVBLA1L0T0 632 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 WNT9AO14904 365 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 PRNPP04156 253 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 SDC4P31431 198 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 CHRNA3P32297 505 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 TRNP1Q6NT89 227 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 RETSATQ6NUM9 610 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 CCNI2Q6ZMN8 369 aaPredicted RBP18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 ZNF783Q6ZMS7 281 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 TRIM69Q86WT6 500 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 MFSD2AQ8NA29 543 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 NEK11Q8NG66 645 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 OR7D4Q8NG98 312 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 SLC30A5Q8TAD4 765 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 FAM131CQ96AQ9 280 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 ATP13A1Q9HD20 1204 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 TOR4AQ9NXH8 423 aa18.88■□□□□ 0.61
AC004540.1-201ENST00000439120 SRRM3A6NNA2 597 aaPredicted RBP18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 K7ERQ8 282 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 CYP1A1P04798 512 aaPredicted RBP18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 CDK11BP21127 795 aaKnown RBP18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 MMP8P22894 467 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 NSFP46459 744 aaKnown RBP18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 JAM2P57087 298 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 NXPH1P58417 271 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 FMO1Q01740 532 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 MYL5Q02045 173 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 SCAPQ12770 1279 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 STX1AQ16623 288 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 C22orf39Q6P5X5 142 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 PHLDB2Q86SQ0 1253 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 DRC7Q8IY82 874 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 GALNT15Q8N3T1 639 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 TMIEQ8NEW7 156 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 OR2A12Q8NGT7 310 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 GRIN3AQ8TCU5 1115 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 GPT2Q8TD30 523 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 RXFP2Q8WXD0 754 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 PPP1R16AQ96I34 528 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 TNKS2Q9H2K2 1166 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 SEPT11Q9NVA2 429 aaKnown RBP18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 IL36AQ9UHA7 158 aa18.87■□□□□ 0.61
AC004540.1-201ENST00000439120 KNL1Q8NG31 2342 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 C10orf142B7Z368 130 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 PRAMEF26H0Y7S4 382 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 SMAD6O43541 496 aaKnown RBP18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 RNGTTO60942 597 aaKnown RBP18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 ENDOD1O94919 500 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 GLDCP23378 1020 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 DNA2P51530 1060 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 GNA12Q03113 381 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 SLC20A2Q08357 652 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 OVGP1Q12889 678 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 C15orf59Q2T9L4 293 aaPredicted RBP18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 PIP5KL1Q5T9C9 394 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 RWDD4Q6NW29 188 aaKnown RBP18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 RBM43Q6ZSC3 357 aaKnown RBP18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 TMPRSS7Q7RTY8 843 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 BNIPLQ7Z465 357 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 IQCHQ86VS3 1027 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 CCDC86Q9H6F5 360 aaKnown RBP18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 ERVMER34-1Q9H9K5 563 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 ARHGAP20Q9P2F6 1191 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 PPARGC1AQ9UBK2 798 aaKnown RBP18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 OR12D3Q9UGF7 316 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 PTPRBP23467 1997 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 DOCK4Q8N1I0 1966 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 WDFY3Q8IZQ1 3526 aa18.86■□□□□ 0.61
AC004540.1-201ENST00000439120 SPEGQ15772 3267 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 CABIN1Q9Y6J0 2220 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 EPHB6O15197 1021 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 LDOC1O95751 146 aaPredicted RBP18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 CTSLP07711 333 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 CHRNB2P17787 502 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 EPHA8P29322 1005 aaPredicted RBP18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 ETFBP38117 255 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 SERPINH1P50454 418 aaKnown RBP18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 UBXN1Q04323 297 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 ARSIQ5FYB1 569 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 NEK5Q6P3R8 708 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 EID2Q8N6I1 236 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms