RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PPP2R5AQ15172 486 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 NFE2Q16621 373 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 PIK3CD-AS1Q5SR53 167 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 RRAGBQ5VZM2 374 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 FAM90A2PQ658T7 463 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 TTLL5Q6EMB2 1281 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 ABLIM2Q6H8Q1 611 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 KYAT3Q6YP21 454 aaKnown RBP3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 RHPN2Q8IUC4 686 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 MIB2Q96AX9 1013 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZNF845Q96IR2 970 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 BTBD1Q9H0C5 482 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 RBM38Q9H0Z9 239 aaKnown RBP3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 RXFP3Q9NSD7 469 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 PCDHA7Q9UN72 937 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 EMSYQ7Z589 1322 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 FLT4P35916 1363 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 C5P01031 1676 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 LY75O60449 1722 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 NF1P21359 2839 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 MTORP42345 2549 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 CRYBG1Q9Y4K1 1723 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 GCC2Q8IWJ2 1684 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 A0A087WZ62 844 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 TNFRSF13BO14836 293 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 THAP12O43422 761 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 KRT86O43790 486 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 COQ9O75208 318 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 IL18RAPO95256 599 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 CHRNB1P11230 501 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 AKR1A1P14550 325 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 MMP8P22894 467 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 STAT6P42226 847 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 AGTR2P50052 363 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 SEMA3BQ13214 749 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 SEMA5AQ13591 1074 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 KRT81Q14533 505 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 PGM5Q15124 567 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 ELF2Q15723 593 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 ANXA2RQ3ZCQ2 193 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 GLE1Q53GS7 698 aaKnown RBP3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 TMEM196Q5HYL7 178 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 LIPMQ5VYY2 423 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZNF324BQ6AW86 544 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 DHRS13Q6UX07 377 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 CLASRPQ8N2M8 674 aaKnown RBP3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 IQCF1Q8N6M8 205 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 OR52L2PQ8NGH6 319 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 ASB12Q8WXK4 309 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 LPAR1Q92633 364 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 ATP2A3Q93084 1043 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 EME1Q96AY2 570 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 FAM84BQ96KN1 310 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 FSD1Q9BTV5 496 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 SF3B5Q9BWJ5 86 aaKnown RBP3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 TRIM2Q9C040 744 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 AAMDCQ9H7C9 122 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 TMOD4Q9NZQ9 345 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 UTS2RQ9UKP6 389 aa3.31□□□□□ -1.88
HMGB1P18-201ENST00000438801 SSC5DA1L4H1 1573 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 OTOGLQ3ZCN5 2332 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 METP08581 1390 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 FRMPD2Q68DX3 1309 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 A6NNC1 897 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 DCXO43602 365 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 SGPL1O95470 568 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 PROS1P07225 676 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 SLC8A1P32418 973 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 GRM3Q14832 879 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 C6orf10Q5SRN2 563 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 FAXCQ5TGI0 409 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 ISM2Q6H9L7 571 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 CAPRIN2Q6IMN6 1127 aaKnown RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 ACSM6Q6P461 480 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 TLDC1Q6P9B6 456 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 CRTC1Q6UUV9 634 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 SPATA2LQ8IUW3 424 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 CD99L2Q8TCZ2 262 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 TMEM174Q8WUU8 243 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZFPM2Q8WW38 1151 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 GLMPQ8WWB7 406 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 OIT3Q8WWZ8 545 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 OVCA2Q8WZ82 227 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 NEUROG1Q92886 237 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 IQCDQ96DY2 449 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 ERO1AQ96HE7 468 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 PPP1R10Q96QC0 940 aaKnown RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 WDR83Q9BRX9 315 aaKnown RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 GLIS2Q9BZE0 524 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 UNKQ9C0B0 810 aaKnown RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 ERVK-5Q9HDB9 667 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 SNX13Q9Y5W8 968 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 FBN1P35555 2871 aaKnown RBP3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 C4AP0C0L4 1744 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 LMO7Q8WWI1 1683 aa3.3□□□□□ -1.88
HMGB1P18-201ENST00000438801 NBEAL2Q6ZNJ1 2754 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 ARHGAP31Q2M1Z3 1444 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 CCDC194A0A1B0GVG4 234 aa3.29□□□□□ -1.88
HMGB1P18-201ENST00000438801 DPPA5A6NC42 116 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms