RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 UPF3AQ9H1J1 476 aaKnown RBP12.92□□□□□ -0.34
HCG18-236ENST00000438412 RNPEPL1Q9HAU8 725 aa12.92□□□□□ -0.34
HCG18-236ENST00000438412 THAP1Q9NVV9 213 aa12.92□□□□□ -0.34
HCG18-236ENST00000438412 G3BP2Q9UN86 482 aaKnown RBP12.92□□□□□ -0.34
HCG18-236ENST00000438412 CCDC22O60826 627 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 ZNF623O75123 536 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 USP1O94782 785 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 ARNTP27540 789 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 LIMK2P53671 638 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 MPP3Q13368 585 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 TRIM71Q2Q1W2 868 aaKnown RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 ALFQ53S48 1182 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 ZNF789Q5FWF6 425 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 TLDC1Q6P9B6 456 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 KYAT3Q6YP21 454 aaKnown RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 ZNF598Q86UK7 904 aaKnown RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 TEX9Q8N6V9 391 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 CPNE1Q99829 537 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 CRISPLD1Q9H336 500 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 NOP53Q9NZM5 478 aaKnown RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 ACTL7AQ9Y615 435 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 GOLGA8QA0A0J9YX86 632 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 GOLGA8OA6NCC3 632 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 GOLGA8NF8WBI6 632 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 G3V2L1 256 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 J3KR12 359 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 F9P00740 461 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 CYP11A1P05108 521 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 HAPLN1P10915 354 aaPredicted RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 RALBP11234 206 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 MX2P20592 715 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 PAPOLAP51003 745 aaKnown RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 SLC25A3Q00325 362 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 TSPY1Q01534 308 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 SEPT6Q14141 434 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 PSMD5Q16401 504 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 DENND5AQ6IQ26 1287 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 CYS1Q717R9 158 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 RPS27LQ71UM5 84 aaKnown RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 PDZD4Q76G19 769 aaPredicted RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 CEP97Q8IW35 865 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 PHTF2Q8N3S3 785 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.91□□□□□ -0.34
HCG18-236ENST00000438412 PIWIL2Q8TC59 973 aaKnown RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 URGCPQ8TCY9 931 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 MCUR1Q96AQ8 359 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 SGF29Q96ES7 293 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 OMDQ99983 421 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 CCDC106Q9BWC9 280 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 NOL6Q9H6R4 1146 aaKnown RBP12.91□□□□□ -0.34
HCG18-236ENST00000438412 TLE6Q9H808 572 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 ARHGEF38Q9NXL2 777 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 GMIPQ9P107 970 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 PACSIN3Q9UKS6 424 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
HCG18-236ENST00000438412 E9PAM4 449 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 CA12O43570 354 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 AHSGP02765 367 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 SBK3P0C264 359 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 CKBP12277 381 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 CALB2P22676 271 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 SERPINB6P35237 376 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 MAP2K2P36507 400 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 HCAR3P49019 387 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 EFEMP1Q12805 493 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 CNGA3Q16281 694 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 RALGPS1Q5JS13 557 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 TRIM68Q6AZZ1 485 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 SH3RF2Q8TEC5 729 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 KCTD4Q8WVF5 259 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 FAM167BQ9BTA0 163 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 RBM22Q9NW64 420 aaKnown RBP eCLIP12.9□□□□□ -0.342e-10■■□□□ 14.3
HCG18-236ENST00000438412 LOC100653049A0A140TA62 436 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 E9PBE3 544 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 NEMP1O14524 444 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 BIRC5O15392 142 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 KLHL41O60662 606 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 KRT34O76011 436 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 IL1BP01584 269 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 JUNP05412 331 aaKnown RBP12.9□□□□□ -0.34
HCG18-236ENST00000438412 CPA3P15088 417 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 CNTFP26441 200 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 RASSF2P50749 326 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 AIF1P55008 147 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 RCN1Q15293 331 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 SLC9B1Q4ZJI4 515 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 GRTP1Q5TC63 336 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 RSPO2Q6UXX9 243 aaPredicted RBP12.9□□□□□ -0.34
HCG18-236ENST00000438412 CCDC91Q7Z6B0 441 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 TMEM173Q86WV6 379 aaPredicted RBP12.9□□□□□ -0.34
HCG18-236ENST00000438412 NRG4Q8WWG1 115 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 NDNQ99608 321 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 THTPAQ9BU02 230 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 DCDC2Q9UHG0 476 aa12.9□□□□□ -0.34
HCG18-236ENST00000438412 PATJQ8NI35 1801 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms