RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SLC10A7Q0GE19 358 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 IFT88Q13099 833 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 GAREM2Q75VX8 874 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 LRRC49Q8IUZ0 686 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 ZFRQ96KR1 1074 aaKnown RBP21.52■■□□□ 1.04
PTPRF-207ENST00000436724 C17orf80Q9BSJ5 609 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 PPCSQ9HAB8 311 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 UGT1A7Q9HAW7 530 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 UGT1A10Q9HAW8 530 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 UGT1A8Q9HAW9 530 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 SSX2IPQ9Y2D8 614 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 DOCK6Q96HP0 2047 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 A0A0D9SEW6 157 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 ADH1AP07327 375 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 C8AP07357 584 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 TPH1P17752 444 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 GABRR2P28476 465 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 LRRC14Q15048 493 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 RASA2Q15283 850 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 CERCAMQ5T4B2 595 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 ITIH5Q86UX2 942 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 C4orf33Q8N1A6 199 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 ANKRD42Q8N9B4 389 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 SLC44A1Q8WWI5 657 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 SP110Q9HB58 689 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 CASS4Q9NQ75 786 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 DONSONQ9NYP3 566 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 IL1RAPL1Q9NZN1 696 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 STK39Q9UEW8 545 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 OBSL1O75147 1896 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 ERI2A8K979 691 aaKnown RBP21.51■■□□□ 1.03
PTPRF-207ENST00000436724 TSPAN3O60637 253 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 SPAG7O75391 227 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 PRKCHP24723 683 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 PPP3CCP48454 512 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 MAXP61244 160 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 PRPSAP1Q14558 356 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 ACBD5Q5T8D3 534 aaPredicted RBP21.51■■□□□ 1.03
PTPRF-207ENST00000436724 KREMEN2Q8NCW0 462 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 POF1BQ8WVV4 589 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 ATXN2LQ8WWM7 1075 aaKnown RBP21.51■■□□□ 1.03
PTPRF-207ENST00000436724 TRABDQ9H4I3 376 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 INTS9Q9NV88 658 aaKnown RBP21.51■■□□□ 1.03
PTPRF-207ENST00000436724 MAFFQ9ULX9 164 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 PDE4DIPQ5VU43 2346 aa21.51■■□□□ 1.03
PTPRF-207ENST00000436724 NEBLO76041 1014 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 LRG1P02750 347 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 GJA1P17302 382 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 DRD4P21917 467 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 SMAD3P84022 425 aaKnown RBP21.5■■□□□ 1.03
PTPRF-207ENST00000436724 C5orf22Q49AR2 442 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 KDELC2Q7Z4H8 507 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 IPMKQ8NFU5 416 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 MZB1Q8WU39 189 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 SLC22A17Q8WUG5 538 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 FCRL5Q96RD9 977 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 LRRC40Q9H9A6 602 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 NT5MQ9NPB1 228 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 SLC17A6Q9P2U8 582 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 LINC01553A4QN01 128 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 C2orf71A6NGG8 1288 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 INHBAP08476 426 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 MAPKAPK2P49137 400 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 MTA1Q13330 715 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 SERINC3Q13530 473 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 HNRNPDQ14103 355 aaKnown RBP21.5■■□□□ 1.03
PTPRF-207ENST00000436724 ANO4Q32M45 955 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 LRRC6Q86X45 466 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 ADAMTS19Q8TE59 1207 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 SEC16BQ96JE7 1060 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 IKBKGQ9Y6K9 419 aa21.5■■□□□ 1.03
PTPRF-207ENST00000436724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.49■■□□□ 1.03
PTPRF-207ENST00000436724 TTC24A2A3L6 582 aaPredicted RBP21.49■■□□□ 1.03
PTPRF-207ENST00000436724 H3BNC9 293 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 ATP9BO43861 1147 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 PMPCBO75439 489 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 FSBPO95073 299 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 PGAM1P18669 254 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 HDCP19113 662 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 ETFBP38117 255 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 IFNAR2P48551 515 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 CRYMQ14894 314 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 PARP15Q460N3 678 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 STXBP5Q5T5C0 1151 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 ADGRF1Q5T601 910 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 RNF187Q5TA31 235 aaPredicted RBP21.49■■□□□ 1.03
PTPRF-207ENST00000436724 STEAP4Q687X5 459 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 TMC8Q8IU68 726 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 MAB21L3Q8N8X9 362 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 MRPL43Q8N983 215 aaKnown RBP21.49■■□□□ 1.03
PTPRF-207ENST00000436724 SPPL3Q8TCT6 385 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 KLF6Q99612 283 aaPredicted RBP21.49■■□□□ 1.03
PTPRF-207ENST00000436724 LRRC3Q9BY71 257 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 MOCS1Q9NZB8 636 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 ACTL7BQ9Y614 415 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 ACTL7AQ9Y615 435 aa21.49■■□□□ 1.03
PTPRF-207ENST00000436724 GRXCR1A8MXD5 290 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 NR1H3Q13133 447 aa21.48■■□□□ 1.03
PTPRF-207ENST00000436724 PABPC1LQ4VXU2 614 aaKnown RBP21.48■■□□□ 1.03
PTPRF-207ENST00000436724 MARC1Q5VT66 337 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms