RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 LRIG1Q96JA1 1093 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 SLC2A13Q96QE2 648 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 CPXM1Q96SM3 734 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 SIK2Q9H0K1 926 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 EVA1BQ9NVM1 165 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 TMEM51Q9NW97 253 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 RRN3Q9NYV6 651 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 DKK4Q9UBT3 224 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 AK5Q9Y6K8 562 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 CEP192Q8TEP8 1941 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 GTPBP10A4D1E9 387 aaKnown RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 PRAMEF26H0Y7S4 382 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 M0QYT0 321 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 TAF4O00268 1085 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 RRP8O43159 456 aaKnown RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 LATO43561 262 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PLRG1O43660 514 aaKnown RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 PAGE1O75459 146 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 DKK1O94907 266 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 ADCY5O95622 1261 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PRNPP04156 253 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 BMP6P22004 513 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 AKT2P31751 481 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 ABCG1P45844 678 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 SULT1E1P49888 294 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PLK1P53350 603 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 CDH4P55283 916 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 RNASE9P60153 205 aaKnown RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 PPP2CBP62714 309 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PPP2CAP67775 309 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PITX1P78337 314 aaPredicted RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 DAB2P98082 770 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 SEMG2Q02383 582 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 CNTN1Q12860 1018 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 RAPGEF1Q13905 1077 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 DLG2Q15700 870 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 ACBD5Q5T8D3 534 aaPredicted RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 LCE2CQ5TA81 110 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 CXorf57Q6NSI4 855 aaKnown RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 GJB7Q6PEY0 223 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 LRRC69Q6ZNQ3 347 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 FAM183BPQ6ZVS7 135 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 SLC26A9Q7LBE3 791 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 TRIM69Q86WT6 500 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 MARCH9Q86YJ5 346 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 ZDHHC17Q8IUH5 632 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 TMEM35BQ8NCS4 154 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PIP4K2CQ8TBX8 421 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 SAP25Q8TEE9 199 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 BAP1Q92560 729 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PTPRN2Q92932 1015 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PPP1R16AQ96I34 528 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 FAM129BQ96TA1 746 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PRMT1Q99873 361 aaKnown RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 ORAI3Q9BRQ5 295 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 FEM1AQ9BSK4 669 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 REPIN1Q9BWE0 567 aaKnown RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 ERVMER34-1Q9H9K5 563 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PREBQ9HCU5 417 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 ACP6Q9NPH0 428 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 CYTH4Q9UIA0 394 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 PCDHGC3Q9UN70 934 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 MUC22E2RYF6 1773 aaPredicted RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 URB1O60287 2271 aaKnown RBP7.96□□□□□ -1.14
VPS50-203ENST00000436177 NBEAQ8NFP9 2946 aa7.96□□□□□ -1.14
VPS50-203ENST00000436177 KNTC1P50748 2209 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 A0A1W2PR77 199 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 PLK4O00444 970 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 TERTO14746 1132 aaKnown RBP7.95□□□□□ -1.14
VPS50-203ENST00000436177 MCF2LO15068 1137 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 ATP9BO43861 1147 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 SDC3O75056 442 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 PCDH8O95206 1070 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 F9P00740 461 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 ERBB2P04626 1255 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 WNT1P04628 370 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 ALPPL2P10696 532 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 PRKCSHP14314 528 aaPredicted RBP7.95□□□□□ -1.14
VPS50-203ENST00000436177 PRLRP16471 622 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 SLC9A1P19634 815 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 NOS2P35228 1153 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 DRD3P35462 400 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 ACADVLP49748 655 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 DNA2P51530 1060 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 SLC6A3Q01959 620 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 DEUP1Q05D60 604 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 DNAJC3Q13217 504 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 ILKQ13418 452 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 CAMK4Q16566 473 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 MAN2A1Q16706 1144 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 BRMS1LQ5PSV4 323 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 FAM102AQ5T9C2 384 aaPredicted RBP7.95□□□□□ -1.14
VPS50-203ENST00000436177 HES3Q5TGS1 186 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 AGBL4Q5VU57 503 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 RETSATQ6NUM9 610 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 OLFML1Q6UWY5 402 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 TFAP2DQ7Z6R9 452 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 DCAF4L2Q8NA75 395 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 MLKLQ8NB16 471 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 GRIN3AQ8TCU5 1115 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms