RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IL1BP01584 269 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 C5AR1P21730 350 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 GLDCP23378 1020 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 MIPP30301 263 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 PSMD8P48556 350 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 ZNF135P52742 658 aaPredicted RBP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 GALCP54803 685 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 TPI1P60174 286 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 PIGHQ14442 188 aaPredicted RBP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 PUM1Q14671 1186 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 POLD3Q15054 466 aaPredicted RBP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 DUOXA1Q1HG43 343 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 FAM46CQ5VWP2 391 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 TCEAL6Q6IPX3 200 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 LINGO4Q6UY18 593 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 ARFGAP1Q8N6T3 406 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 ARHGEF2Q92974 986 aaKnown RBP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 TCEAL3Q969E4 200 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 RMDN1Q96DB5 314 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 OMDQ99983 421 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 SNRNP25Q9BV90 132 aaKnown RBP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 NUP85Q9BW27 656 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 DHX35Q9H5Z1 703 aaKnown RBP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 TMEM74BQ9NUR3 256 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 GPATCH2LQ9NWQ4 482 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 IP6K2Q9UHH9 426 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 FZD4Q9ULV1 537 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 NENFQ9UMX5 172 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 ATXN2Q99700 1313 aaKnown RBP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 ZSCAN5CA6NGD5 496 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 METTL12A8MUP2 240 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 AKR1B15C9JRZ8 316 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 C1QTNF3-AMACRE9PGA6 284 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 EEF2KO00418 725 aaKnown RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 SMAD6O43541 496 aaKnown RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 AKR1B10O60218 316 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 GDF9O60383 454 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 GNSP15586 552 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 GOT1P17174 413 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 ACSL1P33121 698 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 ACVRL1P37023 503 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 RECQLP46063 649 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 SERPINH1P50454 418 aaKnown RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 LIMK1P53667 647 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 ADKP55263 362 aaKnown RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 YBEYP58557 167 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 TBX2Q13207 712 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 TRIM61Q5EBN2 209 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 DCAF12L1Q5VU92 463 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 C22orf39Q6P5X5 142 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 SLC23A3Q6PIS1 610 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 NIPA2Q8N8Q9 360 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 CTNNBL1Q8WYA6 563 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-207ENST00000435455 DNASE2BQ8WZ79 361 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 PEBP4Q96S96 227 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 EDEM2Q9BV94 578 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 CEP44Q9C0F1 390 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 DLL3Q9NYJ7 618 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 ANAPC7Q9UJX3 599 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 CACNA1AO00555 2505 aa16.61■□□□□ 0.25
SMPD4-207ENST00000435455 A0A1W2PP55 124 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 LNP1A1A4G5 178 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 LRRC72A6NJI9 287 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 PATE3B3GLJ2 98 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 K7ERQ8 282 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 MYO1FO00160 1098 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 SLC30A4O14863 429 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 BNIP3LO60238 219 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 RNASEH2AO75792 299 aaKnown RBP16.6■□□□□ 0.25
SMPD4-207ENST00000435455 CFIP05156 583 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 SERPINF2P08697 491 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 H2AFZP0C0S5 128 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 IRX4P78413 519 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 GFPT1Q06210 699 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-207ENST00000435455 ASTE1Q2TB18 679 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-207ENST00000435455 BOLA3Q53S33 107 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 CYP4V2Q6ZWL3 525 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-207ENST00000435455 H2AFVQ71UI9 128 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 UMODL1-AS1Q8N2C9 162 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 HDDC3Q8N4P3 179 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 PCDH20Q8N6Y1 951 aaKnown RBP16.6■□□□□ 0.25
SMPD4-207ENST00000435455 ISG20Q96AZ6 181 aaKnown RBP16.6■□□□□ 0.25
SMPD4-207ENST00000435455 ARHGEF26Q96DR7 871 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 CCDC42Q96M95 316 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 RTKNQ9BST9 563 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 C6orf106Q9H6K1 298 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-207ENST00000435455 UVRAGQ9P2Y5 699 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 PPM1HQ9ULR3 514 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 SLC6A14Q9UN76 642 aa16.6■□□□□ 0.25
SMPD4-207ENST00000435455 DAPK3O43293 454 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 PRNPP04156 253 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 ARF5P84085 180 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 CA9Q16790 459 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 PARP15Q460N3 678 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 STPG1Q5TH74 334 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 ZNF354CQ86Y25 554 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 AADATQ8N5Z0 425 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 TMIEQ8NEW7 156 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 OR2A12Q8NGT7 310 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 OR2T34Q8NGX1 318 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms