RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 FBXO22Q8NEZ5 403 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 ZNF420Q8TAQ5 688 aaPredicted RBP7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 FEZF2Q8TBJ5 459 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 EFHD2Q96C19 240 aaPredicted RBP7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 ACCSQ96QU6 501 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 OSBPL11Q9BXB4 747 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 TDRD1Q9BXT4 1180 aaKnown RBP7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 GBA3Q9H227 469 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 IFT122Q9HBG6 1241 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 CHST12Q9NRB3 414 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 GIN1Q9NXP7 522 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 B3GNT3Q9Y2A9 372 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 SIP14410 1827 aa7.85□□□□□ -1.15
CNKSR3-202ENST00000433165 ARHGEF37A1IGU5 675 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ZNF195O14628 629 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 XPO1O14980 1071 aaKnown RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 SPTLC1O15269 473 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ESRRBO95718 433 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 CALCAP01258 141 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 EIF2S1P05198 315 aaKnown RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 FGF3P11487 239 aaPredicted RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 KRT5P13647 590 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 TCF4P15884 667 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PRKCHP24723 683 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 GABRB3P28472 473 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 EIF2B2P49770 351 aaKnown RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 NEK2P51955 445 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 FLOT2Q14254 428 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PIGGQ5H8A4 983 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ZCCHC23Q6ZST2 131 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 CLVS1Q8IUQ0 354 aaPredicted RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 KIAA0319LQ8IZA0 1049 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 UBR7Q8N806 425 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PCYOX1LQ8NBM8 494 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 RMND5BQ96G75 393 aaPredicted RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 NACC1Q96RE7 527 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 C11orf70Q9BRQ4 267 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 C11orf84Q9BUA3 381 aaPredicted RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 SHCBP1LQ9BZQ2 653 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 NACA2Q9H009 215 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 CCDC68Q9H2F9 335 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 TPK1Q9H3S4 243 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ARMC7Q9H6L4 198 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ANKEF1Q9NU02 776 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 DDX56Q9NY93 547 aaKnown RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 NCKIPSDQ9NZQ3 722 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PADI3Q9ULW8 664 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 SLC8A2Q9UPR5 921 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PCDHB7Q9Y5E2 793 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 C7orf72A4D263 438 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 LINC01553A4QN01 128 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 TRIM64A6NGJ6 449 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ENPP3O14638 875 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ZC3H11AO75152 810 aaKnown RBP eCLIP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 MAFO75444 373 aaPredicted RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 LYPLA2O95372 231 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PTPN2P17706 415 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 CD52P31358 61 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 NUMBP49757 651 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 THOP1P52888 689 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 OTUD4Q01804 1114 aaKnown RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 C1QBPQ07021 282 aaKnown RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ZNF252P-AS1Q0IIN9 211 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PEX6Q13608 980 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 MOGQ16653 247 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PPP1R2P3Q6NXS1 205 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 C16orf46Q6P387 395 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 SLC24A5Q71RS6 500 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PHTF2Q8N3S3 785 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 GALNT4Q8N4A0 578 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ACTL9Q8TC94 416 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 GRIN3AQ8TCU5 1115 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 TAS1R2Q8TE23 839 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 ARNTL2Q8WYA1 636 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 THAP11Q96EK4 314 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 OLFM1Q99784 485 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 SLC13A1Q9BZW2 595 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 CLK4Q9HAZ1 481 aaKnown RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PRDM16Q9HAZ2 1276 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 MAN1C1Q9NR34 630 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 RGS18Q9NS28 235 aa7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 WRAP73Q9P2S5 460 aaPredicted RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 PTBP2Q9UKA9 531 aaKnown RBP7.84□□□□□ -1.15
CNKSR3-202ENST00000433165 CENPFP49454 3210 aa7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 LOC100653049A0A140TA62 436 aa7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 C3orf70A6NLC5 250 aaPredicted RBP7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 TRDMT1O14717 391 aaKnown RBP7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 LYPLA1O75608 230 aaPredicted RBP7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 KRT34O76011 436 aa7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 ATE1O95260 518 aa7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 XRCC1P18887 633 aaPredicted RBP7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 EPHA3P29320 983 aa7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 GABRB2P47870 512 aa7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 SLC1A6P48664 564 aa7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 YWHAGP61981 247 aaKnown RBP eCLIP7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 ESRRGP62508 458 aa7.83□□□□□ -1.16
CNKSR3-202ENST00000433165 KLF10Q13118 480 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms