RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 NAT8LQ8N9F0 302 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 FGF13Q92913 245 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 ARHGEF2Q92974 986 aaKnown RBP18.62■□□□□ 0.57
HMGN1-206ENST00000431390 RAB6BQ9NRW1 208 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 FAM153AQ9UHL3 310 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 SLC9A3R1O14745 358 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-206ENST00000431390 CCNB1P14635 433 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 MAGEA6P43360 314 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 IL10RBQ08334 325 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 ZBTB17Q13105 803 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 PARP6Q2NL67 630 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 ATAT1Q5SQI0 421 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 ITPRIPL1Q6GPH6 555 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 CXorf57Q6NSI4 855 aaKnown RBP18.61■□□□□ 0.57
HMGN1-206ENST00000431390 PID1Q7Z2X4 250 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 DDI1Q8WTU0 396 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 TEKT5Q96M29 485 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 ASB16Q96NS5 453 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 IL12RB2Q99665 862 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 PHF7Q9BWX1 381 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-206ENST00000431390 S1PR5Q9H228 398 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 SP110Q9HB58 689 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 OBP2AQ9NY56 170 aa18.61■□□□□ 0.57
HMGN1-206ENST00000431390 KLHL8Q9P2G9 620 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-206ENST00000431390 MYO18AQ92614 2054 aaKnown RBP18.6■□□□□ 0.57
HMGN1-206ENST00000431390 H0Y626 953 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 METTL18O95568 372 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 TCF15Q12870 199 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 SEMA5AQ13591 1074 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 HNRNPDQ14103 355 aaKnown RBP18.6■□□□□ 0.57
HMGN1-206ENST00000431390 KCNJ11Q14654 390 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 CEP128Q6ZU80 1094 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 GET4Q7L5D6 327 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-206ENST00000431390 MREGQ8N565 214 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 ZCCHC9Q8N567 271 aaKnown RBP18.6■□□□□ 0.57
HMGN1-206ENST00000431390 PRCCQ92733 491 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-206ENST00000431390 SMARCD2Q92925 531 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 EXOC4Q96A65 974 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 TRPV4Q9HBA0 871 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 ETNK1Q9HBU6 452 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 DENND4AQ7Z401 1863 aa18.6■□□□□ 0.57
HMGN1-206ENST00000431390 PRAMEF11O60813 436 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 PEX11BO96011 259 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 JCHAINP01591 159 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 HOXD9P28356 352 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-206ENST00000431390 ACVRL1P37023 503 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 RENBPP51606 427 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 OXCT1P55809 520 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 TNK2Q07912 1038 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 CDH18Q13634 790 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 FAM78AQ5JUQ0 283 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 ZNF354CQ86Y25 554 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 CARNMT1Q8N4J0 409 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 FBXL6Q8N531 539 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 OR52K2Q8NGK3 314 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 NSMCE1Q8WV22 266 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 RIPOR3Q96MK2 946 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 ZNF599Q96NL3 588 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 ACE2Q9BYF1 805 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-206ENST00000431390 CEP41Q9BYV8 373 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 PHACTR1Q9C0D0 580 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 GBA3Q9H227 469 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 CDH7Q9ULB5 785 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 A0A0D9SEW6 157 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 J3KR12 359 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 TPSB2P20231 275 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 HSPA9P38646 679 aaKnown RBP18.59■□□□□ 0.57
HMGN1-206ENST00000431390 TNNT3P45378 269 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-206ENST00000431390 SLMAPQ14BN4 828 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 TPSAB1Q15661 275 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 FYB2Q5VWT5 728 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 IL31Q6EBC2 164 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 TPGS1Q6ZTW0 290 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 TMC3Q7Z5M5 1100 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 MFN1Q8IWA4 741 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 CCDC117Q8IWD4 279 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-206ENST00000431390 TEX26Q8N6G2 289 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 OR7D4Q8NG98 312 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 PRRX2Q99811 253 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 FRMD8Q9BZ67 464 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-206ENST00000431390 SPHK2Q9NRA0 654 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 CDH22Q9UJ99 828 aa18.59■□□□□ 0.57
HMGN1-206ENST00000431390 ZDBF2Q9HCK1 2354 aa18.58■□□□□ 0.57
HMGN1-206ENST00000431390 ZBTB24O43167 697 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-206ENST00000431390 ATP8B1O43520 1251 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 KDELR3O43731 214 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 PPFIA2O75334 1257 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 PENKP01210 267 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-206ENST00000431390 MTHFRP42898 656 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 CDK16Q00536 496 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 SIGLEC14Q08ET2 396 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 ANKRD22Q5VYY1 191 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 RNF219Q5W0B1 726 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-206ENST00000431390 PPP1R21Q6ZMI0 780 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 HDXQ7Z353 690 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 TAB3Q8N5C8 712 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-206ENST00000431390 CNTD1Q8N815 330 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 ZNF557Q8N988 423 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-206ENST00000431390 FIBINQ8TAL6 211 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 BPIFB1Q8TDL5 484 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms