RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 TBC1D3LB9A6J9 549 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 SLC7A4O43246 635 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 TNFSF14O43557 240 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 ZMPSTE24O75844 475 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 GFPT2O94808 682 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 GJB6O95452 261 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 CYP1A1P04798 512 aaPredicted RBP16.67■□□□□ 0.26
PTPRA-206ENST00000430705 TBC1D3HP0C7X1 549 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 EPHA8P29322 1005 aaPredicted RBP16.67■□□□□ 0.26
PTPRA-206ENST00000430705 MAT2AP31153 395 aaKnown RBP16.67■□□□□ 0.26
PTPRA-206ENST00000430705 PTP4A2Q12974 167 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 SUZ12Q15022 739 aaKnown RBP16.67■□□□□ 0.26
PTPRA-206ENST00000430705 TBC1D3GQ6DHY5 549 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 TBC1D3CQ6IPX1 549 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 NAPEPLDQ6IQ20 393 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 TRIM69Q86WT6 500 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 TBC1D3Q8IZP1 549 aaPredicted RBP16.67■□□□□ 0.26
PTPRA-206ENST00000430705 DCAF4L2Q8NA75 395 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 ENOX1Q8TC92 643 aaKnown RBP16.67■□□□□ 0.26
PTPRA-206ENST00000430705 C1orf74Q96LT6 269 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 VPS16Q9H269 839 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 CAAP1Q9H8G2 361 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 SIK3Q9Y2K2 1263 aa16.67■□□□□ 0.26
PTPRA-206ENST00000430705 BNIP3LO60238 219 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 ENDOD1O94919 500 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 CAMK2BQ13554 666 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 CT47A1Q5JQC4 288 aaPredicted RBP16.66■□□□□ 0.26
PTPRA-206ENST00000430705 MANEALQ5VSG8 457 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 C22orf39Q6P5X5 142 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 ARCQ7LC44 396 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 DSG4Q86SJ6 1040 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 PHLDB2Q86SQ0 1253 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 SETD3Q86TU7 594 aaPredicted RBP16.66■□□□□ 0.26
PTPRA-206ENST00000430705 JOSD2Q8TAC2 188 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 MDM1Q8TC05 714 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 VOPP1Q96AW1 172 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 PCDHB18PQ96TA0 734 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 MAGEB5Q9BZ81 275 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 KDM4CQ9H3R0 1056 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 ACTL7AQ9Y615 435 aa16.66■□□□□ 0.26
PTPRA-206ENST00000430705 C1QTNF3-AMACRE9PGA6 284 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 TLR4O00206 839 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 CD160O95971 181 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 F9P00740 461 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 MMP8P22894 467 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 CHRNA3P32297 505 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 CLDN6P56747 220 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 POLR2FP61218 127 aaKnown RBP16.65■□□□□ 0.26
PTPRA-206ENST00000430705 ARF5P84085 180 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 CDR2Q01850 454 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 C15orf59Q2T9L4 293 aaPredicted RBP16.65■□□□□ 0.26
PTPRA-206ENST00000430705 SFMBT2Q5VUG0 894 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 FAM46CQ5VWP2 391 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 ATP11CQ8NB49 1132 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 SLC30A5Q8TAD4 765 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 HAPLN3Q96S86 360 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 C2orf49Q9BVC5 232 aaPredicted RBP16.65■□□□□ 0.26
PTPRA-206ENST00000430705 TNKS2Q9H2K2 1166 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 NLRC4Q9NPP4 1024 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 GDF3Q9NR23 364 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
PTPRA-206ENST00000430705 NDFIP2Q9NV92 336 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 FTSJ1Q9UET6 329 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 WASF2Q9Y6W5 498 aa16.65■□□□□ 0.26
PTPRA-206ENST00000430705 FAM149AA5PLN7 773 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 FAM72CH0Y354 149 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 DFNA5O60443 496 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 SRGAP2O75044 1071 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 ZNF18P17022 549 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 SOX5P35711 763 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 KRT83P78385 493 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 ATP11AP98196 1134 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 BNIP3Q12983 259 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 DNAJC3Q13217 504 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 SMAD1Q15797 465 aaKnown RBP16.64■□□□□ 0.25
PTPRA-206ENST00000430705 CCDC14Q49A88 953 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 C6orf118Q5T5N4 469 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 FAM72AQ5TYM5 149 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 FAM72DQ6L9T8 149 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 DHRS13Q6UX07 377 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 FAM72BQ86X60 149 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 ZNF677Q86XU0 584 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 MFSD2AQ8NA29 543 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 TMEM145Q8NBT3 493 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 C11orf70Q9BRQ4 267 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 HSD3B7Q9H2F3 369 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 PREBQ9HCU5 417 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 FANCLQ9NW38 375 aa16.64■□□□□ 0.25
PTPRA-206ENST00000430705 TPX2Q9ULW0 747 aaKnown RBP16.64■□□□□ 0.25
PTPRA-206ENST00000430705 ZFR2Q9UPR6 939 aaKnown RBP16.64■□□□□ 0.25
PTPRA-206ENST00000430705 ILVBLA1L0T0 632 aa16.63■□□□□ 0.25
PTPRA-206ENST00000430705 C2CD4BA6NLJ0 364 aa16.63■□□□□ 0.25
PTPRA-206ENST00000430705 RNGTTO60942 597 aaKnown RBP16.63■□□□□ 0.25
PTPRA-206ENST00000430705 UNGP13051 313 aaPredicted RBP16.63■□□□□ 0.25
PTPRA-206ENST00000430705 PRLRP16471 622 aa16.63■□□□□ 0.25
PTPRA-206ENST00000430705 OR1E1P30953 314 aa16.63■□□□□ 0.25
PTPRA-206ENST00000430705 RXRGP48443 463 aa16.63■□□□□ 0.25
PTPRA-206ENST00000430705 SERPINH1P50454 418 aaKnown RBP16.63■□□□□ 0.25
PTPRA-206ENST00000430705 CLCN6P51797 869 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms