RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 GDI1P31150 447 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 GPD2P43304 727 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 MAGOHP61326 146 aaKnown RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 OOSP2Q86WS3 158 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 NAF1Q96HR8 494 aaKnown RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 HCRTO43612 131 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 CD86P42081 329 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 GRM3Q14832 879 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 SPDYE7PQ495Y7 208 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 C16orf87Q6PH81 154 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 FBXO36Q8NEA4 188 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 PCDH18Q9HCL0 1135 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 DNPEPQ9ULA0 475 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 CHRNB2P17787 502 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 SEC13P55735 322 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 ZC3H3Q8IXZ2 948 aaKnown RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 KCTD15Q96SI1 283 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 CENPKQ9BS16 269 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 RCOR3Q9P2K3 495 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 VPS26AO75436 327 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 HOXD8P13378 290 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TAS2R40P59535 323 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 POU6F1Q14863 301 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 POM121L1PQ3SYA9 428 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TRMT11Q7Z4G4 463 aaKnown RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 PRKD2Q9BZL6 878 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 IARS2Q9NSE4 1012 aaKnown RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 THEGQ9P2T0 379 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TLR6Q9Y2C9 796 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 A0A1B0GVM2 712 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TCAF2A6NFQ2 919 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 CTSAP10619 480 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 GJA1P17302 382 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 ALDH18A1P54886 795 aaKnown RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 SETMARQ53H47 684 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 RINLQ6ZS11 566 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 RD3Q7Z3Z2 195 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 CD274Q9NZQ7 290 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 AURKCQ9UQB9 309 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 PTGESO14684 152 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TPH1P17752 444 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 DAB2IPQ5VWQ8 1189 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TXNDC8Q6A555 127 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 OVCA2Q8WZ82 227 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 SPATA16Q9BXB7 569 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 LMAN2LQ9H0V9 348 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 CRTAC1Q9NQ79 661 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 CTGFP29279 349 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 ERVK-21P61565 698 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 HSP90AA5PQ58FG0 334 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 PSTKQ8IV42 348 aaKnown RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 CLEC4CQ8WTT0 213 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 PAAF1Q9BRP4 392 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TASP1Q9H6P5 420 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TMPRSS4Q9NRS4 437 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 SCN9AQ15858 1988 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 RNF225M0QZC1 329 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 KYNUQ16719 465 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 NRBF2Q96F24 287 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 TLR10Q9BXR5 811 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-207ENST00000429896 V9GYQ6 96 aa13.13□□□□□ -0.31
PTCH1-207ENST00000429896 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 A0A0A0MRY4 1105 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 MEIS3P2A8K0S8 358 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 A8MX80 341 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 ANKS1BQ7Z6G8 1248 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 GDPD5Q8WTR4 605 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 SPATA13Q96N96 652 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 SDCBP2Q9H190 292 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 CCSER2Q9H7U1 834 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 MEI4A8MW99 385 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 TEX28O15482 410 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 TMCC1O94876 653 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 MAPKAPK2P49137 400 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 AUHQ13825 339 aaKnown RBP13.12□□□□□ -0.31
PTCH1-207ENST00000429896 SGO1Q5FBB7 561 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 LHX8Q68G74 356 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 SHDQ96IW2 340 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 VRTNQ9H8Y1 702 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 SLC39A10Q9ULF5 831 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 RTP2Q5QGT7 225 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 CCNI2Q6ZMN8 369 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-207ENST00000429896 SLC4A5Q9BY07 1137 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 MTRRQ9UBK8 725 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 C2CD4BA6NLJ0 364 aa13.12□□□□□ -0.31
PTCH1-207ENST00000429896 SUPT3HB4E1H0 165 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms