RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 EDDM13A0A1B0GTR0 161 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 J3KR12 359 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 APOL1O14791 398 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 DCLK1O15075 740 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 ZSCAN12O43309 604 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 RNASEH1O60930 286 aaKnown RBP14.86□□□□□ -0.03
SGCE-204ENST00000428696 CHRM1P11229 460 aaPredicted RBP14.86□□□□□ -0.03
SGCE-204ENST00000428696 ACADMP11310 421 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 SRCP12931 536 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 SERPINB6P35237 376 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 PTPN5P54829 565 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 ARF5P84085 180 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 SLC20A2Q08357 652 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 HNRNPA1L2Q32P51 320 aaKnown RBP14.86□□□□□ -0.03
SGCE-204ENST00000428696 MFSD7Q6UXD7 560 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 Q6ZVU0 165 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 STK40Q8N2I9 435 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 SH2D3CQ8N5H7 860 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 UBL4BQ8N7F7 174 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 LRRC57Q8N9N7 239 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 CCNYQ8ND76 341 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 MDGA1Q8NFP4 955 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 RLN3Q8WXF3 142 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 PRCCQ92733 491 aaPredicted RBP14.86□□□□□ -0.03
SGCE-204ENST00000428696 HEMGNQ9BXL5 484 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 LRRC19Q9H756 370 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 FAM86C1Q9NVL1 165 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 PCDHA3Q9Y5H8 950 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 CAPN6Q9Y6Q1 641 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 KIAA1549LQ6ZVL6 1849 aa14.86□□□□□ -0.03
SGCE-204ENST00000428696 CCDC66A2RUB6 948 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 MAP3K13O43283 966 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 ZMPSTE24O75844 475 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 IL1BP01584 269 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 GABRG2P18507 467 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 CETN2P41208 172 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 RWDD2BP57060 319 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 GEMIN4P57678 1058 aaKnown RBP14.85□□□□□ -0.03
SGCE-204ENST00000428696 TCF15Q12870 199 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 SRSF5Q13243 272 aaKnown RBP14.85□□□□□ -0.03
SGCE-204ENST00000428696 POM121L1PQ3SYA9 428 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 USP39Q53GS9 565 aaKnown RBP14.85□□□□□ -0.03
SGCE-204ENST00000428696 C9orf64Q5T6V5 341 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 SPOCD1Q6ZMY3 1216 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 ARHGAP36Q6ZRI8 547 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 NT5DC3Q86UY8 548 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 MMAAQ8IVH4 418 aaKnown RBP14.85□□□□□ -0.03
SGCE-204ENST00000428696 KATNAL2Q8IYT4 538 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 FAM71BQ8TC56 605 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 LRRN4Q8WUT4 740 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 SIPA1Q96FS4 1042 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 MYO19Q96H55 970 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 RBM41Q96IZ5 413 aaKnown RBP14.85□□□□□ -0.03
SGCE-204ENST00000428696 MRGPRX1Q96LB2 322 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 ALS2CR12Q96Q35 445 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 TM6SF2Q9BZW4 377 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 ZSCAN32Q9NX65 697 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 UBA2Q9UBT2 640 aaPredicted RBP14.85□□□□□ -0.03
SGCE-204ENST00000428696 IPO11Q9UI26 975 aaKnown RBP14.85□□□□□ -0.03
SGCE-204ENST00000428696 CACNA1IQ9P0X4 2223 aa14.85□□□□□ -0.03
SGCE-204ENST00000428696 TARSL2A2RTX5 802 aaKnown RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 ZSCAN5CA6NGD5 496 aaPredicted RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 C3orf70A6NLC5 250 aaPredicted RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 ATP9BO43861 1147 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 NDUFV2P19404 249 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 CTNNA1P35221 906 aaKnown RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 SERPINH1P50454 418 aaKnown RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 GBE1Q04446 702 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 ZNF211Q13398 564 aaPredicted RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 CAMK2GQ13555 558 aaPredicted RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 ENPP2Q13822 863 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 NCBP2-AS2Q69YL0 99 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 CEP68Q76N32 757 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 FAM124AQ86V42 546 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 LONP2Q86WA8 852 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 ARHGAP12Q8IWW6 846 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 ATPAF2Q8N5M1 289 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 PQLC3Q8N755 202 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 KDM1BQ8NB78 822 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 OR6K2Q8NGY2 324 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 OR2T3Q8NH03 318 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 EXD1Q8NHP7 514 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 NSMCE1Q8WV22 266 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 PTPRN2Q92932 1015 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 CCDC114Q96M63 670 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 MKRN2Q9H000 416 aaKnown RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 HS3ST2Q9Y278 367 aa14.84□□□□□ -0.03
SGCE-204ENST00000428696 MYO18AQ92614 2054 aaKnown RBP14.84□□□□□ -0.03
SGCE-204ENST00000428696 MFSD11O43934 449 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 CST8O60676 142 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 NEBLO76041 1014 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 PAPSS2O95340 614 aaPredicted RBP14.83□□□□□ -0.03
SGCE-204ENST00000428696 DNTTP04053 509 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 ZFXP17010 805 aaPredicted RBP14.83□□□□□ -0.03
SGCE-204ENST00000428696 PSMD8P48556 350 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 RHOAP61586 193 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 TFDP2Q14188 446 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 ZNF528Q3MIS6 628 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 TFDP3Q5H9I0 405 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 C22orf39Q6P5X5 142 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 264.7 ms