RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SORCS1Q8WY21 1168 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 EXOC4Q96A65 974 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 CHFRQ96EP1 664 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ALG14Q96F25 216 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 LMLNQ96KR4 655 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 SPATA13Q96N96 652 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF599Q96NL3 588 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ASB2Q96Q27 587 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 PNKPQ96T60 521 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 P2RY13Q9BPV8 354 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 TRIM51Q9BSJ1 452 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 CINPQ9BW66 212 aaPredicted RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 C8orf33Q9H7E9 229 aaPredicted RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 PDFQ9HBH1 243 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 TRPV5Q9NQA5 729 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC2A4RGQ9NR83 387 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 HAUS2Q9NVX0 235 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ASIC3Q9UHC3 531 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 FEZ2Q9UHY8 353 aaPredicted RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC25A13Q9UJS0 675 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 INTS6Q9UL03 887 aaKnown RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 DUSP12Q9UNI6 340 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC27A6Q9Y2P4 619 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 COL4A3Q01955 1670 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 DENND4CQ5VZ89 1909 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 MUC3AQ02505 3323 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 PRRT4C9JH25 899 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 F5H423 210 aaPredicted RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 RAD51CO43502 376 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 OPHN1O60890 802 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZMPSTE24O75844 475 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 TMCC1O94876 653 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 JCHAINP01591 159 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 KRT14P02533 472 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ASLP04424 464 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ATP5BP06576 529 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 CISD3P0C7P0 127 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZSCAN5DPP0CG00 497 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 CCNB1P14635 433 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ETS1P14921 441 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 PTPN3P26045 913 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 STIP1P31948 543 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 GRIA2P42262 883 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 STK19P49842 368 aaPredicted RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 SERPINH1P50454 418 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 RENBPP51606 427 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 PLK1P53350 603 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ECT2LQ008S8 904 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 SULT2A1Q06520 285 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 MESP2Q0VG99 397 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 WASHC5Q12768 1159 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 RFTN1Q14699 578 aaPredicted RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 LBRQ14739 615 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 EIF4HQ15056 248 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 TRIP13Q15645 432 aaPredicted RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 FNDC3BQ53EP0 1204 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 FAM182AQ5T1J6 154 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 MARC1Q5VT66 337 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ITPRIPL1Q6GPH6 555 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 TPRG1Q6ZUI0 275 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 NUDT18Q6ZVK8 323 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 MAATS1Q7Z4T9 603 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 PRUNE1Q86TP1 453 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 RALGPS2Q86X27 583 aaPredicted RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 SFTPA1Q8IWL2 248 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 SUGP1Q8IWZ8 645 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 PHTF2Q8N3S3 785 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 MMGT1Q8N4V1 131 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 TAB3Q8N5C8 712 aaPredicted RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ATP11CQ8NB49 1132 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 CCHCR1Q8TD31 782 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 CYB5D2Q8WUJ1 264 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 UCMAQ8WVF2 138 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 MAML1Q92585 1016 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ACDQ96AP0 544 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 MSANTD3Q96H12 275 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 RPL10LQ96L21 214 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 AGAP3Q96P47 875 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 PCDH9Q9HC56 1237 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 NT5MQ9NPB1 228 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ARHGEF3Q9NR81 526 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 RBM22Q9NW64 420 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 SEPT3Q9UH03 358 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 PCYOX1Q9UHG3 505 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 RSPH14Q9UHP6 348 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 FBXO10Q9UK96 956 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 FBXL21Q9UKT6 434 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 CA14Q9ULX7 337 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 SORCS3Q9UPU3 1222 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 DRG1Q9Y295 367 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 FCF1Q9Y324 198 aaKnown RBP8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 ACTL7AQ9Y615 435 aa8.06□□□□□ -1.12
HMGA1P4-201ENST00000428643 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 C19orf67A6NJJ6 358 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 K7ERQ8 282 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZBTB24O43167 697 aaPredicted RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 BNIP3LO60238 219 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 PEX11BO96011 259 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 MT-CO1P00395 513 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms