RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ITKQ08881 620 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 IFFO1Q0D2I5 559 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 SLC29A2Q14542 456 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 ZNF77Q15935 545 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 BBS9Q3SYG4 887 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 CXorf57Q6NSI4 855 aaKnown RBP15.4■□□□□ 0.06
GINS3-203ENST00000426538 BBS5Q8N3I7 341 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.4■□□□□ 0.06
GINS3-203ENST00000426538 GOLGA6L1Q8N7Z2 621 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 OR52K2Q8NGK3 314 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 PYROXD1Q8WU10 500 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 C9orf72Q96LT7 481 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 TTC25Q96NG3 672 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 ZNF599Q96NL3 588 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 GLOD4Q9HC38 313 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 XAB2Q9HCS7 855 aaKnown RBP15.4■□□□□ 0.06
GINS3-203ENST00000426538 TNRC18O15417 2968 aaPredicted RBP15.4■□□□□ 0.06
GINS3-203ENST00000426538 HELZP42694 1942 aaKnown RBP15.4■□□□□ 0.06
GINS3-203ENST00000426538 ANXA9O76027 345 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 ACSL3O95573 720 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 WEE1P30291 646 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 MMP13P45452 471 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 SLC10A7Q0GE19 358 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 LBRQ14739 615 aaKnown RBP15.4■□□□□ 0.06
GINS3-203ENST00000426538 HSP90B2PQ58FF3 399 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 HP1BP3Q5SSJ5 553 aaPredicted RBP15.4■□□□□ 0.06
GINS3-203ENST00000426538 TMCO4Q5TGY1 634 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 CES5AQ6NT32 575 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 OTOP3Q7RTS5 596 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 OTUB2Q96DC9 234 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 FCRL5Q96RD9 977 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 NT5MQ9NPB1 228 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 PLK2Q9NYY3 685 aa15.4■□□□□ 0.06
GINS3-203ENST00000426538 PDE4DIPQ5VU43 2346 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 E7ESA3 106 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 CBX4O00257 560 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 AVILO75366 819 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 AP2A1O95782 977 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 PEX11BO96011 259 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 HLA-DQB2P05538 268 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 HOXD9P28356 352 aaPredicted RBP15.39■□□□□ 0.05
GINS3-203ENST00000426538 IFNAR2P48551 515 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 NUMBP49757 651 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 EIF3BP55884 814 aaKnown RBP15.39■□□□□ 0.05
GINS3-203ENST00000426538 USP4Q13107 963 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 ADAM15Q13444 863 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 LRIT3Q3SXY7 679 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 DNAJC21Q5F1R6 531 aaKnown RBP15.39■□□□□ 0.05
GINS3-203ENST00000426538 FSCBQ5H9T9 825 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 ATAT1Q5SQI0 421 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 LRIG3Q6UXM1 1119 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 GET4Q7L5D6 327 aaPredicted RBP15.39■□□□□ 0.05
GINS3-203ENST00000426538 CAND1Q86VP6 1230 aaKnown RBP15.39■□□□□ 0.05
GINS3-203ENST00000426538 ANKMY2Q8IV38 441 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 PALM2Q8IXS6 379 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 TEX26Q8N6G2 289 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 FGF13Q92913 245 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 ZBTB9Q96C00 473 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 FEM1AQ9BSK4 669 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 ACE2Q9BYF1 805 aaPredicted RBP15.39■□□□□ 0.05
GINS3-203ENST00000426538 GDE1Q9NZC3 331 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 NINJ2Q9NZG7 142 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 KIAA1522Q9P206 1035 aaPredicted RBP15.39■□□□□ 0.05
GINS3-203ENST00000426538 UBA2Q9UBT2 640 aaPredicted RBP15.39■□□□□ 0.05
GINS3-203ENST00000426538 VPS28Q9UK41 221 aa15.39■□□□□ 0.05
GINS3-203ENST00000426538 OPA1O60313 960 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 CACNG3O60359 315 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 MLNP12872 115 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 MTM1Q13496 603 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 ZNF235Q14590 738 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 RFTN1Q14699 578 aaPredicted RBP15.38■□□□□ 0.05
GINS3-203ENST00000426538 MSS51Q4VC12 460 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 LRRC8BQ6P9F7 803 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 SYCE2Q6PIF2 218 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 POTEHQ6S545 545 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 LEKR1Q6ZMV7 388 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 EP400NLQ6ZTU2 488 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 NPAS3Q8IXF0 933 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 ADGRG2Q8IZP9 1017 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 FBXO36Q8NEA4 188 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 FIBINQ8TAL6 211 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 RIN3Q8TB24 985 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 SMARCD2Q92925 531 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 IRF7Q92985 503 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 LRRC39Q96DD0 335 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 LRRC40Q9H9A6 602 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 SPHK2Q9NRA0 654 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 UBP1Q9NZI7 540 aa15.38■□□□□ 0.05
GINS3-203ENST00000426538 GOLGA6L10A6NI86 522 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 BANF1O75531 89 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 NUDT17P0C025 328 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 MZF1P28698 734 aaPredicted RBP15.37■□□□□ 0.05
GINS3-203ENST00000426538 GEMP55040 296 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 SPARCL1Q14515 664 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 FASTKD3Q14CZ7 662 aaKnown RBP15.37■□□□□ 0.05
GINS3-203ENST00000426538 CCDC38Q502W7 563 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 FYB2Q5VWT5 728 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 LINC00523Q86TU6 105 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 TMEM25Q86YD3 366 aa15.37■□□□□ 0.05
GINS3-203ENST00000426538 ZNF557Q8N988 423 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms