RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 PPP2CBP62714 309 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 PPP2CAP67775 309 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 NRG1Q02297 640 aaPredicted RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 GNA12Q03113 381 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 KLHL30Q0D2K2 578 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 CNTN1Q12860 1018 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 TBX2Q13207 712 aaPredicted RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 SEMA3BQ13214 749 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 MTA1Q13330 715 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 PRAMEF14Q5SWL7 426 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 KIAA0895LQ68EN5 471 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 PSAPL1Q6NUJ1 521 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 RWDD4Q6NW29 188 aaKnown RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 CYP4V2Q6ZWL3 525 aaPredicted RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 SLFN11Q7Z7L1 901 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 ATP11CQ8NB49 1132 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 SNX19Q92543 992 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 ARHGEF2Q92974 986 aaKnown RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 NTAN1Q96AB6 310 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 FAM131CQ96AQ9 280 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 ARRDC3Q96B67 414 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 ACE2Q9BYF1 805 aaPredicted RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 FBRSQ9HAH7 460 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 SLC25A13Q9UJS0 675 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 FZD10Q9ULW2 581 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 FCF1Q9Y324 198 aaKnown RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 DOCK4Q8N1I0 1966 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 A0A1B0GTW7 788 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 ADRB1P08588 477 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 CCDC172P0C7W6 258 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 RHOQP17081 205 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 C5AR1P21730 350 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 GKP32189 559 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 NNMTP40261 264 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
GPC1-204ENST00000426280 ADPRHP54922 357 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 OXCT1P55809 520 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 SCAPQ12770 1279 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 ELAVL3Q14576 367 aaKnown RBP13.03□□□□□ -0.32
GPC1-204ENST00000426280 C6orf118Q5T5N4 469 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 PIP4P1Q86T03 277 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 CPNE8Q86YQ8 564 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 DCAF4L2Q8NA75 395 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 OR14C36Q8NHC7 312 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 PIP4K2CQ8TBX8 421 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 IQCDQ96DY2 449 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 MRFAP1L1Q96HT8 127 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 SLC6A18Q96N87 628 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 OMDQ99983 421 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 SGK2Q9HBY8 427 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 ATP13A1Q9HD20 1204 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 ARHGAP20Q9P2F6 1191 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 MYO1AQ9UBC5 1043 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 NCKAP1Q9Y2A7 1128 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 PAXBP1Q9Y5B6 917 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 SNX11Q9Y5W9 270 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 NYNRINQ9P2P1 1898 aaKnown RBP13.03□□□□□ -0.32
GPC1-204ENST00000426280 CACNA1AO00555 2505 aa13.03□□□□□ -0.32
GPC1-204ENST00000426280 RNASEH1O60930 286 aaKnown RBP13.02□□□□□ -0.33
GPC1-204ENST00000426280 MFAP3LO75121 409 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 GZMAP12544 262 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 L1CAMP32004 1257 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 CHRNA3P32297 505 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 DPP6P42658 865 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 KRT83P78385 493 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 FOXK2Q01167 660 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 TRIM14Q14142 442 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 KIF19Q2TAC6 998 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 HLA-BQ31612 363 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 ARL13BQ3SXY8 428 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 TTC31Q49AM3 519 aaPredicted RBP13.02□□□□□ -0.33
GPC1-204ENST00000426280 TDRD12Q587J7 1177 aaKnown RBP13.02□□□□□ -0.33
GPC1-204ENST00000426280 ARSIQ5FYB1 569 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 AGBL4Q5VU57 503 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 DCUN1D2Q6PH85 259 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 DPY19L3Q6ZPD9 716 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 OR8D1Q8WZ84 308 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D31Q96DN5 1066 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 VCPIP1Q96JH7 1222 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 CNPY3Q9BT09 278 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 ISCUQ9H1K1 167 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 DNAAF2Q9NVR5 837 aaKnown RBP13.02□□□□□ -0.33
GPC1-204ENST00000426280 CNOT8Q9UFF9 292 aaKnown RBP13.02□□□□□ -0.33
GPC1-204ENST00000426280 PCSK1NQ9UHG2 260 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 SCML1Q9UN30 329 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 CA5BQ9Y2D0 317 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 FNDC3AQ9Y2H6 1198 aaKnown RBP13.02□□□□□ -0.33
GPC1-204ENST00000426280 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
GPC1-204ENST00000426280 PI4KAP42356 2102 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 A0A087X0T9 212 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 SPAARA0A1B0GVQ0 90 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 A0A1W2PPC4 97 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 CREB3O43889 395 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 SH3BP5O60239 455 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 SERPING1P05155 500 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 FAM228BP0C875 321 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms