RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-206ENST00000426196 F5H5T6 163 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 PIK3R2O00459 728 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 KPNA3O00505 521 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-206ENST00000426196 TPP1O14773 563 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 NEFLP07196 543 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 LIPCP11150 499 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 TACR2P21452 398 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 RGS7P49802 495 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 MXI1P50539 228 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 PDX1P52945 283 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 PLK1P53350 603 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 YWHAEP62258 255 aaKnown RBP14.56□□□□□ -0.08
HDAC6-206ENST00000426196 FZD2Q14332 565 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 DRAP1Q14919 205 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-206ENST00000426196 TGIF1Q15583 401 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 DLG2Q15700 870 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 MANEAQ5SRI9 462 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 PERM1Q5SV97 790 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 KYAT3Q6YP21 454 aaKnown RBP14.56□□□□□ -0.08
HDAC6-206ENST00000426196 CEP57L1Q8IYX8 460 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 LMX1AQ8TE12 382 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 DQX1Q8TE96 717 aaKnown RBP14.56□□□□□ -0.08
HDAC6-206ENST00000426196 SLC39A13Q96H72 371 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 CCDC114Q96M63 670 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 STRADBQ9C0K7 418 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 GPR27Q9NS67 375 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 RAB20Q9NX57 234 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 IPO11Q9UI26 975 aaKnown RBP14.56□□□□□ -0.08
HDAC6-206ENST00000426196 ACSL6Q9UKU0 697 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 TRAF3IP3Q9Y228 551 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 HS3ST3A1Q9Y663 406 aa14.56□□□□□ -0.08
HDAC6-206ENST00000426196 RP1L1Q8IWN7 2480 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-206ENST00000426196 SPTY2D1-AS1A0A0U1RR47 76 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 O00370 1275 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 KLRC4O43908 158 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 NOBOXO60393 691 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 FBXO21O94952 628 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 VDRP11473 427 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 JUNDP17535 347 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 PSMC2P35998 433 aaKnown RBP14.55□□□□□ -0.08
HDAC6-206ENST00000426196 RABIFP47224 123 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 SRSF6Q13247 344 aaKnown RBP14.55□□□□□ -0.08
HDAC6-206ENST00000426196 TBR1Q16650 682 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 C4orf17Q53FE4 359 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 TTC39BQ5VTQ0 682 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-206ENST00000426196 RAB11FIP2Q7L804 512 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 GRAMD1CQ8IYS0 662 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 CCAR2Q8N163 923 aaKnown RBP14.55□□□□□ -0.08
HDAC6-206ENST00000426196 BTN2A3PQ96KV6 586 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 CCDC3Q9BQI4 270 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 EPB41L5Q9HCM4 733 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 GEMIN8Q9NWZ8 242 aaKnown RBP14.55□□□□□ -0.08
HDAC6-206ENST00000426196 FAM13BQ9NYF5 915 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 XPO7Q9UIA9 1087 aaKnown RBP14.55□□□□□ -0.08
HDAC6-206ENST00000426196 PCDHGA4Q9Y5G9 962 aa14.55□□□□□ -0.08
HDAC6-206ENST00000426196 TCAF2A6NFQ2 919 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 TMX2-CTNND1H3BSU7 103 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 RPL13P26373 211 aaKnown RBP14.54□□□□□ -0.08
HDAC6-206ENST00000426196 UGT1A5P35504 534 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 NFIL3Q16649 462 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 RABGAP1LQ5R372 815 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 SEL1L3Q68CR1 1132 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 PMF1Q6P1K2 205 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 LCLAT1Q6UWP7 414 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 CIR1Q86X95 450 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-206ENST00000426196 CLEC4CQ8WTT0 213 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 BTN2A2Q8WVV5 523 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 FAM149B1Q96BN6 582 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 EEF2KMTQ96G04 330 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 BMFQ96LC9 184 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 BOCQ9BWV1 1114 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 PPP4R2Q9NY27 417 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 KIAA1257Q9ULG3 409 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 ZFR2Q9UPR6 939 aaKnown RBP14.54□□□□□ -0.08
HDAC6-206ENST00000426196 PAXBP1Q9Y5B6 917 aa14.54□□□□□ -0.08
HDAC6-206ENST00000426196 ZFC3H1O60293 1989 aaKnown RBP14.54□□□□□ -0.08
HDAC6-206ENST00000426196 POM121BA6NF01 834 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 STX10O60499 249 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 YEATS4O95619 227 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 PRNPP04156 253 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 CTSLP07711 333 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 JMJD7P0C870 316 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 CHRNA3P32297 505 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 RPS21P63220 83 aaKnown RBP14.53□□□□□ -0.08
HDAC6-206ENST00000426196 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-206ENST00000426196 CUL2Q13617 745 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 CUL4AQ13619 759 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 TMEM259Q4ZIN3 620 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 CXorf57Q6NSI4 855 aaKnown RBP14.53□□□□□ -0.08
HDAC6-206ENST00000426196 ERN2Q76MJ5 926 aaKnown RBP14.53□□□□□ -0.08
HDAC6-206ENST00000426196 TAC4Q86UU9 113 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 SLC35F3Q8IY50 421 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 SH2D3CQ8N5H7 860 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 ZNF564Q8TBZ8 553 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-206ENST00000426196 SLC35F5Q8WV83 523 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 HSFY1Q96LI6 401 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 ZNF396Q96N95 335 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-206ENST00000426196 MIS12Q9H081 205 aa14.53□□□□□ -0.08
HDAC6-206ENST00000426196 ADNPQ9H2P0 1102 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms