RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	WASH4P	A8MWX3	477 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	FAM72C	H0Y354	149 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	AVIL	O75366	819 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	MAP3K6	O95382	1288 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	AP2A1	O95782	977 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	C1QA	P02745	245 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	FGFR3	P22607	806 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	PTPN3	P26045	913 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	NPY2R	P49146	381 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	KPNA1	P52294	538 aa	Predicted RBP	10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	WDR4	P57081	412 aa	Known RBP	10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	GPR17	Q13304	367 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	LRRC14	Q15048	493 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	CTXN3	Q4LDR2	81 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	TEX44	Q53QW1	395 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	VARS2	Q5ST30	1063 aa	Known RBP	10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	RARS2	Q5T160	578 aa	Known RBP	10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	FAXC	Q5TGI0	409 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	FAM72A	Q5TYM5	149 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	FAM72D	Q6L9T8	149 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	KIAA1841	Q6NSI8	718 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	TIGD7	Q6NT04	549 aa	Predicted RBP	10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	UNC5A	Q6ZN44	842 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	LINC00523	Q86TU6	105 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	FAM72B	Q86X60	149 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	TRIM42	Q8IWZ5	723 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	KLHDC8B	Q8IXV7	354 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	PDCD7	Q8N8D1	485 aa	Known RBP	10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	ADAM32	Q8TC27	787 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	LRRC8C	Q8TDW0	803 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	ACMSD	Q8TDX5	336 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	FATE1	Q969F0	183 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	TBC1D31	Q96DN5	1066 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	CFAP36	Q96G28	342 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	SPATA17	Q96L03	361 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	TEKT5	Q96M29	485 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	CASD1	Q96PB1	797 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	TMEM209	Q96SK2	561 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	ELAC2	Q9BQ52	826 aa	Known RBP	10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	RHOBTB2	Q9BYZ6	727 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	PITPNM3	Q9BZ71	974 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	GBA3	Q9H227	469 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	RETREG1	Q9H6L5	497 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	BFAR	Q9NZS9	450 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	KLHL8	Q9P2G9	620 aa	Predicted RBP	10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	HCST	Q9UBK5	93 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	LIMD1	Q9UGP4	676 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	FBXL21	Q9UKT6	434 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	TLR6	Q9Y2C9	796 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	ARL2BP	Q9Y2Y0	163 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	STARD13	Q9Y3M8	1113 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	MAD1L1	Q9Y6D9	718 aa		10.25	□□□□□ -0.77
POLR1A-204	ENST00000424089	EPG5	Q9HCE0	2579 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089		A0A1W2PPM1	405 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	KCNU1	A8MYU2	1149 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089		I6L893	689 aa	Predicted RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	CACNG3	O60359	315 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	FSBP	O95073	299 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	OAS1	P00973	400 aa	Known RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	POLB	P06746	335 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	ASGR2	P07307	311 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	GSTA1	P08263	222 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	AOC1	P19801	751 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	TAC1	P20366	129 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	RPA3	P35244	121 aa	Predicted RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	MLLT6	P55198	1093 aa	Predicted RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	RPL10A	P62906	217 aa	Known RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	ANGPT1	Q15389	498 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	DBN1	Q16643	649 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	SPANXN3	Q5MJ09	141 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	STXBP5	Q5T5C0	1151 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	RNF187	Q5TA31	235 aa	Predicted RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	MANEAL	Q5VSG8	457 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	ANKS3	Q6ZW76	656 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	MARK2	Q7KZI7	788 aa	Known RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	SPATA21	Q7Z572	469 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	SCD5	Q86SK9	330 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	CHSY1	Q86X52	802 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	SCN4B	Q8IWT1	228 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	CTAGE3P	Q8IX95	158 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	C4orf33	Q8N1A6	199 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	AGGF1	Q8N302	714 aa	eCLIP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	ZNF276	Q8N554	614 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	PPM1N	Q8N819	430 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	MRPL43	Q8N983	215 aa	Known RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	SCAMP5	Q8TAC9	235 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	CCT6B	Q92526	530 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	TMEM169	Q96HH4	297 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	APOPT1	Q96IL0	206 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	LRRC40	Q9H9A6	602 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	ANLN	Q9NQW6	1124 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	TMPRSS4	Q9NRS4	437 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	ABI2	Q9NYB9	513 aa	Predicted RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	SEPT10	Q9P0V9	454 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	AAR2	Q9Y312	384 aa	Known RBP	10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	MFHAS1	Q9Y4C4	1052 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	DMXL1	Q9Y485	3027 aa		10.24	□□□□□ -0.77
POLR1A-204	ENST00000424089	DENND4A	Q7Z401	1863 aa		10.23	□□□□□ -0.77
POLR1A-204	ENST00000424089	C2orf71	A6NGG8	1288 aa		10.23	□□□□□ -0.77

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