RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 TMEM106CQ9BVX2 250 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 LRRC40Q9H9A6 602 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 ALG13Q9NP73 1137 aaKnown RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 BFARQ9NZS9 450 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 SCN5AQ14524 2016 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 JCHAINP01591 159 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 DNAJB2P25686 324 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 ALDH3A1P30838 453 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 EFEMP1Q12805 493 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 BNIP1Q12981 228 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 DUSP4Q13115 394 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 KCTD11Q693B1 232 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 ANO7Q6IWH7 933 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 SLC8B1Q6J4K2 584 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 RSPO2Q6UXX9 243 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 OTOAQ7RTW8 1153 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 STKLD1Q8NE28 680 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 FBXO22Q8NEZ5 403 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 DPF3Q92784 378 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 ECT2Q9H8V3 914 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 PPARGC1AQ9UBK2 798 aaKnown RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 MTRRQ9UBK8 725 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 AAR2Q9Y312 384 aaKnown RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 BACE2Q9Y5Z0 518 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 CDY1Q9Y6F8 540 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 TTC3P53804 2025 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 MAGEB16A2A368 324 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 UPP2O95045 317 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 CCNB1P14635 433 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 CD68P34810 354 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-202ENST00000424011 PBX3P40426 434 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 ETV4P43268 484 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 RANBP1P43487 201 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 TUFMP49411 452 aaKnown RBP16.86■□□□□ 0.29
CMTM3-202ENST00000424011 LINC00523Q86TU6 105 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 TMEM173Q86WV6 379 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-202ENST00000424011 ARHGAP12Q8IWW6 846 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 DNAAF3Q8N9W5 541 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 GPR152Q8TDT2 470 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 FAM111AQ96PZ2 611 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 VPS11Q9H270 941 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 PIH1D1Q9NWS0 290 aaKnown RBP16.86■□□□□ 0.29
CMTM3-202ENST00000424011 MARCH2Q9P0N8 246 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 TANC1Q9C0D5 1861 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 A8MUI8 341 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 MATN3O15232 486 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 DHRS4L1P0CG22 281 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 NFKB1P19838 968 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 CUL3Q13618 768 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 ANO4Q32M45 955 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 SPANXN3Q5MJ09 141 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 C10orf120Q5SQS8 335 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 AFMIDQ63HM1 303 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 NAPEPLDQ6IQ20 393 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 TAS1R1Q7RTX1 841 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 GBP7Q8N8V2 638 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-202ENST00000424011 ARNTL2Q8WYA1 636 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 PTPRN2Q92932 1015 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 CASS4Q9NQ75 786 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 LRRC42Q9Y546 428 aa16.86■□□□□ 0.29
CMTM3-202ENST00000424011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-202ENST00000424011 SOAT2O75908 522 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 WFS1O76024 890 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 KRT16P08779 473 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 IMPDH2P12268 514 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 RHOQP17081 205 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 NPY2RP49146 381 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 NDST2P52849 883 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 CRADDP78560 199 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 RING1Q06587 406 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 BMPR2Q13873 1038 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 KIAA1841Q6NSI8 718 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 CDHR3Q6ZTQ4 885 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 LMNTD2Q8IXW0 634 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-202ENST00000424011 ZSCAN18Q8TBC5 510 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-202ENST00000424011 BCL7CQ8WUZ0 217 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-202ENST00000424011 OXNAD1Q96HP4 312 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-202ENST00000424011 UBE2OQ9C0C9 1292 aaKnown RBP16.85■□□□□ 0.29
CMTM3-202ENST00000424011 ZYG11BQ9C0D3 744 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 SLC39A8Q9C0K1 460 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 PIDD1Q9HB75 910 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 VANGL2Q9ULK5 521 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 PLXNA3P51805 1871 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 CARNS1A5YM72 827 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 EIF4E1BA6NMX2 242 aaKnown RBP16.85■□□□□ 0.29
CMTM3-202ENST00000424011 CACNG3O60359 315 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 MAFKO60675 156 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 ANXA9O76027 345 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 VNN2O95498 520 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 EFEMP2O95967 443 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 ITGB8P26012 769 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 MAGEA8P43361 318 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 PSMD5Q16401 504 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 CMPK2Q5EBM0 449 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 MS4A13Q5J8X5 152 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 PIK3R6Q5UE93 754 aa16.85■□□□□ 0.29
CMTM3-202ENST00000424011 PRSS55Q6UWB4 352 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-202ENST00000424011 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.85■□□□□ 0.294e-6■■■□□ 19.2
CMTM3-202ENST00000424011 MARK2Q7KZI7 788 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms