RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 C9P02748 559 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 RLN1P04808 185 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 PPM1LQ5SGD2 360 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 XRRA1Q6P2D8 792 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 ZDHHC13Q8IUH4 622 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 ITFG1Q8TB96 612 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 KAT2BQ92831 832 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 RNF208Q9H0X6 261 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 SNX7Q9UNH6 387 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 CCDC154A6NI56 674 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 ERN1O75460 977 aaKnown RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 CTSEP14091 401 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 ANPEPP15144 967 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 ANXA11P50995 505 aaKnown RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 IL18Q14116 193 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 FASTKQ14296 549 aaKnown RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 TCEA2Q15560 299 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 ZCCHC8Q6NZY4 707 aaKnown RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 DEFB132Q7Z7B7 95 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 HAVCR1Q96D42 359 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 MTMR12Q9C0I1 747 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 RSPH9Q9H1X1 276 aaPredicted RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 GPATCH2LQ9NWQ4 482 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 LRRC14BA6NHZ5 514 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 OMPP47874 163 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 RHOAP61586 193 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 TROAPQ12815 778 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 LEMD2Q8NC56 503 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 GFM1Q96RP9 751 aaKnown RBP11.27□□□□□ -0.6
TNC-203ENST00000423613 PAFAH2Q99487 392 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 UGT2B28Q9BY64 529 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 PTGFRNQ9P2B2 879 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 LYVE1Q9Y5Y7 322 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 SLC12A8A0AV02 714 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 CYP2C8P10632 490 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 SLC2A3P11169 496 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 GEMP55040 296 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 USP46P62068 366 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 HERVK_113P62684 666 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 PLD1Q13393 1074 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 C11orf63Q6NUN7 778 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.6
TNC-203ENST00000423613 ULK2Q8IYT8 1036 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 C1QTNF1Q9BXJ1 281 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 SENP6Q9GZR1 1112 aaPredicted RBP11.27□□□□□ -0.6
TNC-203ENST00000423613 ABCB9Q9NP78 766 aa11.27□□□□□ -0.6
TNC-203ENST00000423613 RNF17Q9BXT8 1623 aaKnown RBP11.27□□□□□ -0.61
TNC-203ENST00000423613 CASTOR2A6NHX0 329 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 CYB561D2O14569 222 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 PROCP04070 461 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 RHOCP08134 193 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 TGM3Q08188 693 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 EMC1Q8N766 993 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 TRPV3Q8NET8 790 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.61
TNC-203ENST00000423613 SPHKAPQ2M3C7 1700 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 RGS10O43665 173 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 TSPAN3O60637 253 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 FGRP09769 529 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 ACO1P21399 889 aaKnown RBP11.27□□□□□ -0.61
TNC-203ENST00000423613 KLRK1P26718 216 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 MAPK1P28482 360 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 SLC20A2Q08357 652 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 STYK1Q6J9G0 422 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 GALNT18Q6P9A2 607 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 TRMT11Q7Z4G4 463 aaKnown RBP11.27□□□□□ -0.61
TNC-203ENST00000423613 R3HCC1LQ7Z5L2 792 aaKnown RBP11.27□□□□□ -0.61
TNC-203ENST00000423613 ERO1BQ86YB8 467 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 CDK20Q8IZL9 346 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 PIK3C3Q8NEB9 887 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 MED28Q9H204 178 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 XKR8Q9H6D3 395 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 TIMMDC1Q9NPL8 285 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 TMCO1Q9UM00 188 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 PCDHB9Q9Y5E1 797 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 CHRNGP07510 517 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 CYP11B1P15538 503 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 TTKP33981 857 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 TEKT5Q96M29 485 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 RIOK2Q9BVS4 552 aaKnown RBP11.27□□□□□ -0.61
TNC-203ENST00000423613 RNF38Q9H0F5 515 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 STOX2Q9P2F5 926 aaPredicted RBP11.27□□□□□ -0.61
TNC-203ENST00000423613 TRPC4Q9UBN4 977 aa11.27□□□□□ -0.61
TNC-203ENST00000423613 UBQLN1Q9UMX0 589 aaKnown RBP11.27□□□□□ -0.61
TNC-203ENST00000423613 STX16-NPEPL1H3BU86 382 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 STX16O14662 325 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 TM9SF1O15321 606 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 PABPC1P11940 636 aaKnown RBP11.26□□□□□ -0.61
TNC-203ENST00000423613 ME2P23368 584 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 MAN2A2P49641 1150 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 CYP4F8P98187 520 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 PAGE2BQ5JRK9 111 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 CES5AQ6NT32 575 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 NET1Q7Z628 596 aaPredicted RBP11.26□□□□□ -0.61
TNC-203ENST00000423613 TTC7BQ86TV6 843 aa11.26□□□□□ -0.61
TNC-203ENST00000423613 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms