RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 NCKAP1Q9Y2A7 1128 aa15.84■□□□□ 0.13
SPC24-201ENST00000423327 FNDC3AQ9Y2H6 1198 aaKnown RBP15.84■□□□□ 0.13
SPC24-201ENST00000423327 TMCO5BA8MYB1 307 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 DDX3XO00571 662 aaKnown RBP eCLIP15.83■□□□□ 0.125e-7■■■□□ 17.7
SPC24-201ENST00000423327 WNT9AO14904 365 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 RTN2O75298 545 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 CEACAM1P13688 526 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 CD27P26842 260 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 ACVRL1P37023 503 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 KRT83P78385 493 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 FANCCQ00597 558 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 GNA12Q03113 381 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 ASIC2Q16515 512 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 FILIP1LQ4L180 1135 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 ATP11CQ8NB49 1132 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 CHST14Q8NCH0 376 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 OR2T34Q8NGX1 318 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 PIP4K2CQ8TBX8 421 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 VOPP1Q96AW1 172 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 SLC6A18Q96N87 628 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 PPP1R9BQ96SB3 815 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 ACE2Q9BYF1 805 aaPredicted RBP15.83■□□□□ 0.12
SPC24-201ENST00000423327 TRIM7Q9C029 511 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 TMEM248Q9NWD8 314 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 WASF3Q9UPY6 502 aa15.83■□□□□ 0.12
SPC24-201ENST00000423327 MAP1BP46821 2468 aaKnown RBP15.82■□□□□ 0.12
SPC24-201ENST00000423327 A0A1W2PPC4 97 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 CBX4O00257 560 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 ALOX15BO15296 676 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 BNIP3LO60238 219 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 TOP3BO95985 862 aaKnown RBP15.82■□□□□ 0.12
SPC24-201ENST00000423327 SERPINC1P01008 464 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 WNT1P04628 370 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 PLEKP08567 350 aaPredicted RBP15.82■□□□□ 0.12
SPC24-201ENST00000423327 CCDC172P0C7W6 258 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 RHOQP17081 205 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 TNFAIP3P21580 790 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 GRIA4P48058 902 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 AFF3P51826 1226 aaKnown RBP15.82■□□□□ 0.12
SPC24-201ENST00000423327 TAS2R38P59533 333 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 CNTN1Q12860 1018 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 MAMLD1Q13495 774 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 KIF19Q2TAC6 998 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 ARL13BQ3SXY8 428 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 SFMBT2Q5VUG0 894 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 PLEKHA7Q6IQ23 1121 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.82■□□□□ 0.12
SPC24-201ENST00000423327 ZNF783Q6ZMS7 281 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 ARFGAP1Q8N6T3 406 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 OR14C36Q8NHC7 312 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 ARRDC3Q96B67 414 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 TBC1D31Q96DN5 1066 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 CNTNAP3BQ96NU0 1288 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 CAMK1GQ96NX5 476 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 CNTNAP3Q9BZ76 1288 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 ZDHHC5Q9C0B5 715 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 TNKS2Q9H2K2 1166 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 NOL6Q9H6R4 1146 aaKnown RBP15.82■□□□□ 0.12
SPC24-201ENST00000423327 GAREM1Q9H706 876 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 ATP13A1Q9HD20 1204 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 DNAI1Q9UI46 699 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 FZD10Q9ULW2 581 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 SNX11Q9Y5W9 270 aa15.82■□□□□ 0.12
SPC24-201ENST00000423327 CEP295Q9C0D2 2601 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 SPAARA0A1B0GVQ0 90 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 LRRC72A6NJI9 287 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 LATO43561 262 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 PLRG1O43660 514 aaKnown RBP15.81■□□□□ 0.12
SPC24-201ENST00000423327 SH3BP5O60239 455 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 SKILP12757 684 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 MAPKAPK2P49137 400 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 SERPINH1P50454 418 aaKnown RBP15.81■□□□□ 0.12
SPC24-201ENST00000423327 CLCN6P51797 869 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 HLA-BQ31612 363 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 ZSCAN23Q3MJ62 389 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 FIGNQ5HY92 759 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 PIP5KL1Q5T9C9 394 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 HGSNATQ68CP4 663 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 RWDD4Q6NW29 188 aaKnown RBP15.81■□□□□ 0.12
SPC24-201ENST00000423327 DPY19L3Q6ZPD9 716 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 SLFN11Q7Z7L1 901 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 ARHGEF2Q92974 986 aaKnown RBP15.81■□□□□ 0.12
SPC24-201ENST00000423327 VCPIP1Q96JH7 1222 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 PEBP4Q96S96 227 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 CNPY3Q9BT09 278 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 SPON2Q9BUD6 331 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 ARHGAP20Q9P2F6 1191 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 FCF1Q9Y324 198 aaKnown RBP15.81■□□□□ 0.12
SPC24-201ENST00000423327 WASF2Q9Y6W5 498 aa15.81■□□□□ 0.12
SPC24-201ENST00000423327 EPG5Q9HCE0 2579 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 A0A1W2PR77 199 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 CBFA2T3O75081 653 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 CHRNA3P32297 505 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 CCR5P51681 352 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 SHC2P98077 582 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 CYP4V2Q6ZWL3 525 aaPredicted RBP15.8■□□□□ 0.12
SPC24-201ENST00000423327 TMC6Q7Z403 805 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 DSG4Q86SJ6 1040 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 EDEM3Q9BZQ6 932 aa15.8■□□□□ 0.12
SPC24-201ENST00000423327 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms